Evidence map›Paper›PMID 33489001›Full record

ArticleComputational and structural biotechnology journal2020

Cross-talk between Hippo and Wnt signalling pathways in intestinal crypts: Insights from an agent-based model.

Daniel Ward, Sandra Montes Olivas, Alexander Fletcher, Martin Homer, Lucia Marucci

Open access · goldAbstract read
In one paragraph

Article in Computational and structural biotechnology journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.6field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Intestinal Wnt in the transition from physiology to oncology.World journal of clinical oncology · 2022
    Review
  10. Article
  11. Review
  12. Article
  13. Toward Engineering Biosystems With Emergent Collective Functions.Frontiers in bioengineering and biotechnology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Daniel WardDepartment of Engineering Mathematics, University of Bristol, Bristol BS8 1UB, UK.
Sandra Montes OlivasDepartment of Engineering Mathematics, University of Bristol, Bristol BS8 1UB, UK.
Alexander FletcherSchool of Mathematics and Statistics, University of Sheffield, Sheffield S3 7RH, UK.
Martin HomerDepartment of Engineering Mathematics, University of Bristol, Bristol BS8 1UB, UK.
Lucia MarucciDepartment of Engineering Mathematics, University of Bristol, Bristol BS8 1UB, UK.
University of Bristol · GBUniversity of Sheffield · GB

Funding

Biotechnology and Biological Sciences Research Council BB/L01386X/1Medical Research Council MR/N021444/1
6 · The paper itself

Abstract

Intestinal crypts are responsible for the total cell renewal of the lining of the intestines; this turnover is governed by the interplay between signalling pathways and the cell cycle. The role of Wnt signalling in cell proliferation and differentiation in the intestinal crypt has been extensively studied, with increased signalling found towards the lower regions of the crypt. Recent studies have shown that the Wnt signalling gradient found within the crypt may arise as a result of division-based spreading from a Wnt 'reservoir' at the crypt base. The discovery of the Hippo pathway's involvement in maintaining crypt homeostasis is more recent; a mechanistic understanding of Hippo pathway dynamics, and its possible cross-talk with the Wnt pathway, remains lacking. To explore how the interplay between these pathways may control crypt homeostasis, we extended an ordinary differential equation model of the Wnt signalling pathway to include a phenomenological description of Hippo signalling in single cells, and then coupled it to a cell-based description of cell movement, proliferation and contact inhibition in agent-based simulations. Furthermore, we compared an imposed Wnt gradient with a division-based Wnt gradient model. Our results suggest that Hippo signalling affects the Wnt pathway by reducing the presence of free cytoplasmic β-catenin, causing cell cycle arrest. We also show that a division-based spreading of Wnt can form a Wnt gradient, resulting in proliferative dynamics comparable to imposed-gradient models. Finally, a simulated APC double mutant, with misregulated Wnt and Hippo signalling activity, is predicted to cause monoclonal conversion of the crypt.

Indexed as

Agent-based modellingHippo pathwayIntestinal cryptSystems BiologyWnt pathway

Identifiers

PMID33489001
PMCPMC7790739
OpenAlexW2999805930

What Socratic holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.