Evidence map›Paper›PMID 33510206›Full record

ArticleScientific reports2021

Arabidopsis REI-LIKE proteins activate ribosome biogenesis during cold acclimation.

Bo Eng Cheong, Olga Beine-Golovchuk, Michal Gorka, William Wing Ho Ho, Federico Martinez-Seidel, Alexandre Augusto Pereira Firmino, Aleksandra Skirycz, Ute Roessner, Joachim Kopka

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Remodelled ribosomal populations synthesize a specific proteome in proliferating plant tissue during cold.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
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  10. International journal of molecular sciences · 2022
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  13. Dynamic Changes in Seed Germination under Low-Temperature Stress in Maize.International journal of molecular sciences · 2022
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  15. BMC bioinformatics · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Bo Eng CheongSchool of BioSciences, The University of Melbourne, Victoria, 3010, Australia.
Olga Beine-GolovchukMax-Planck-Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476, Potsdam-Golm, Germany.
Michal GorkaMax-Planck-Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476, Potsdam-Golm, Germany.
William Wing Ho HoSchool of BioSciences, The University of Melbourne, Victoria, 3010, Australia.
Federico Martinez-SeidelSchool of BioSciences, The University of Melbourne, Victoria, 3010, Australia.
Alexandre Augusto Pereira FirminoMax-Planck-Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476, Potsdam-Golm, Germany.
Aleksandra SkiryczMax-Planck-Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476, Potsdam-Golm, Germany.
Ute RoessnerSchool of BioSciences, The University of Melbourne, Victoria, 3010, Australia.
Joachim KopkaMax-Planck-Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476, Potsdam-Golm, Germany. Kopka@mpimp-golm.mpg.de.
Max Planck Institute of Molecular Plant Physiology · DEUniversity of Melbourne · AUUniversiti of Malaysia Sabah · MY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Arabidopsis REIL proteins are cytosolic ribosomal 60S-biogenesis factors. After shift to 10 °C, reil mutants deplete and slowly replenish non-translating eukaryotic ribosome complexes of root tissue, while controlling the balance of non-translating 40S- and 60S-subunits. Reil mutations respond by hyper-accumulation of non-translating subunits at steady-state temperature; after cold-shift, a KCl-sensitive 80S sub-fraction remains depleted. We infer that Arabidopsis may buffer fluctuating translation by pre-existing non-translating ribosomes before de novo synthesis meets temperature-induced demands. Reil1 reil2 double mutants accumulate 43S-preinitiation and pre-60S-maturation complexes and alter paralog composition of ribosomal proteins in non-translating complexes. With few exceptions, e.g. RPL3B and RPL24C, these changes are not under transcriptional control. Our study suggests requirement of de novo synthesis of eukaryotic ribosomes for long-term cold acclimation, feedback control of NUC2 and eIF3C2 transcription and links new proteins, AT1G03250, AT5G60530, to plant ribosome biogenesis. We propose that Arabidopsis requires biosynthesis of specialized ribosomes for cold acclimation.

Indexed as

AcclimatizationCold TemperatureGene Expression Regulation, PlantArabidopsisArabidopsis ProteinsCytosolMutationOrgan SpecificityPlant DevelopmentProtein BiosynthesisProteomicsRibosomesRibosome SubunitsTranscription, GeneticArabidopsis Proteins

Identifiers

PMID33510206
PMCPMC7844247
OpenAlexW3121338743

What Socratic holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.