Evidence map›Paper›PMID 33526843›Full record

ArticleCommunications biology2021

Molecular characterization of a marine turtle tumor epizootic, profiling external, internal and postsurgical regrowth tumors.

Kelsey Yetsko, Jessica A Farrell, Nicholas B Blackburn, Liam Whitmore, Maximilian R Stammnitz, Jenny Whilde, Catherine B Eastman, Devon Rollinson Ramia, Rachel Thomas, Aleksandar Krstic and 11 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
9.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
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  11. Insights on Immune Function in Free-Ranging Green Sea Turtles (Animals : an open access journal from MDPI · 2021
    Article
  12. The Concurrent Detection of Chelonid Alphaherpesvirus 5 andAnimals : an open access journal from MDPI · 2021
    Article
  13. PeerJ · 2021
    Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 7 institutions in 4 countries.

Kelsey Yetsko *The Whitney Laboratory for Marine Bioscience and Sea Turtle Hospital, University of Florida, St. Augustine, FL, 32080, USA.
Jessica A Farrell *The Whitney Laboratory for Marine Bioscience and Sea Turtle Hospital, University of Florida, St. Augustine, FL, 32080, USA.ORCID http://orcid.org/0000-0003-2303-7204
Nicholas B BlackburnDepartment of Human Genetics, School of Medicine, University of Texas Rio Grande Valley, Brownsville, TX, USA.ORCID http://orcid.org/0000-0002-9774-1539
Liam WhitmoreThe Whitney Laboratory for Marine Bioscience and Sea Turtle Hospital, University of Florida, St. Augustine, FL, 32080, USA.
Maximilian R StammnitzTransmissible Cancer Group, Department of Veterinary Medicine, University of Cambridge, Cambridge, CB3 0ES, UK.ORCID http://orcid.org/0000-0002-1704-9199
Jenny WhildeThe Whitney Laboratory for Marine Bioscience and Sea Turtle Hospital, University of Florida, St. Augustine, FL, 32080, USA.
Catherine B EastmanThe Whitney Laboratory for Marine Bioscience and Sea Turtle Hospital, University of Florida, St. Augustine, FL, 32080, USA.
Devon Rollinson RamiaThe Whitney Laboratory for Marine Bioscience and Sea Turtle Hospital, University of Florida, St. Augustine, FL, 32080, USA.
Rachel ThomasThe Whitney Laboratory for Marine Bioscience and Sea Turtle Hospital, University of Florida, St. Augustine, FL, 32080, USA.
Aleksandar KrsticSystems Biology Ireland & Precision Oncology Ireland, School of Medicine, University College Dublin, Belfield, Dublin, 4, Ireland.
Paul LinserThe Whitney Laboratory for Marine Bioscience and Sea Turtle Hospital, University of Florida, St. Augustine, FL, 32080, USA.
Simon CreerMolecular Ecology and Fisheries Genetics Laboratory, School of Biological Sciences, Bangor University, Bangor, Gwynedd, LL57 2UW, UK.ORCID http://orcid.org/0000-0003-3124-3550
Gary CarvalhoMolecular Ecology and Fisheries Genetics Laboratory, School of Biological Sciences, Bangor University, Bangor, Gwynedd, LL57 2UW, UK.
Mariana A DevlinSea Turtle Inc., South Padre Island, TX, USA.
Nina NahviSea Turtle Inc., South Padre Island, TX, USA.
Ana Cristina LeandroDepartment of Human Genetics, School of Medicine, University of Texas Rio Grande Valley, Brownsville, TX, USA.
Thomas W deMaarGladys Porter Zoo, Brownsville, TX, USA.
Brooke BurkhalterThe Whitney Laboratory for Marine Bioscience and Sea Turtle Hospital, University of Florida, St. Augustine, FL, 32080, USA.
Elizabeth P MurchisonTransmissible Cancer Group, Department of Veterinary Medicine, University of Cambridge, Cambridge, CB3 0ES, UK.
Christine SchnitzlerThe Whitney Laboratory for Marine Bioscience and Sea Turtle Hospital, University of Florida, St. Augustine, FL, 32080, USA.ORCID http://orcid.org/0000-0002-5001-6524
David J DuffyThe Whitney Laboratory for Marine Bioscience and Sea Turtle Hospital, University of Florida, St. Augustine, FL, 32080, USA. duffy@whitney.ufl.edu.ORCID http://orcid.org/0000-0002-6075-8855
Sea Turtle Conservancy · USBangor University · GBUniversity College Dublin · IEUniversity of Cambridge · GBPerot Museum of Nature and Science · USThe University of Texas Rio Grande Valley · USUniversity of Tasmania · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sea turtle populations are under threat from an epizootic tumor disease (animal epidemic) known as fibropapillomatosis. Fibropapillomatosis continues to spread geographically, with prevalence of the disease also growing at many longer-affected sites globally. However, we do not yet understand the precise environmental, mutational and viral events driving fibropapillomatosis tumor formation and progression.Here we perform transcriptomic and immunohistochemical profiling of five fibropapillomatosis tumor types: external new, established and postsurgical regrowth tumors, and internal lung and kidney tumors. We reveal that internal tumors are molecularly distinct from the more common external tumors. However, they have a small number of conserved potentially therapeutically targetable molecular vulnerabilities in common, such as the MAPK, Wnt, TGFβ and TNF oncogenic signaling pathways. These conserved oncogenic drivers recapitulate remarkably well the core pan-cancer drivers responsible for human cancers. Fibropapillomatosis has been considered benign, but metastatic-related transcriptional signatures are strongly activated in kidney and established external tumors. Tumors in turtles with poor outcomes (died/euthanized) have genes associated with apoptosis and immune function suppressed, with these genes providing putative predictive biomarkers.Together, these results offer an improved understanding of fibropapillomatosis tumorigenesis and provide insights into the origins, inter-tumor relationships, and therapeutic treatment for this wildlife epizootic.

Indexed as

Biomarkers, TumorCell ProliferationTurtlesAnimalsGene Expression ProfilingGene Expression Regulation, NeoplasticGene Regulatory NetworksImmunohistochemistryNeoplasm Recurrence, LocalPapillomaSignal TransductionSkin NeoplasmsTranscriptomeTumor Virus InfectionsBiomarkers, Tumor

Identifiers

PMID33526843
PMCPMC7851172
OpenAlexW3126699940

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.