Evidence map›Paper›PMID 33529166›Full record

ArticleThe Journal of clinical investigation2021

Combined immunodeficiency due to a mutation in the γ1 subunit of the coat protein I complex.

Wayne Bainter, Craig D Platt, Seung-Yeol Park, Kelsey Stafstrom, Jacqueline G Wallace, Zachary T Peters, Michel J Massaad, Michel Becuwe, Sandra Andrea Salinas, Jennifer Jones and 13 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 25 citations in OpenAlex.

  1. COPI Coatomer Regulates Several Steps of HDL Metabolism.Arteriosclerosis, thrombosis, and vascular biology · 2026
    Article
  2. Article
  3. Article
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  5. Article
  6. Article
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  8. Article
  9. Review
  10. Article
  11. Immune dysregulation caused by homozygous mutations in CBLB.The Journal of clinical investigation · 2022
    Article
  12. Article
  13. Mutations ofInternational journal of molecular sciences · 2022
    Article
  14. Review
  15. Article
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 7 institutions in 3 countries.

Wayne BainterDivision of Immunology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Craig D PlattDivision of Immunology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Seung-Yeol ParkDivision of Rheumatology, Inflammation and Immunity, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Kelsey StafstromDivision of Immunology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Jacqueline G WallaceDivision of Immunology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Zachary T PetersDivision of Immunology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Michel J MassaadDivision of Immunology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Michel BecuweDepartment of Genetics and Complex Diseases and Department of Molecular Metabolism, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
Sandra Andrea SalinasDivision of Immunogenetics, Department of Pediatrics, Morgan Stanley Children's Hospital of New York Presbyterian, Columbia University Irving Medical Center, New York, New York, USA.
Jennifer JonesDivision of Immunology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Sarah Beaussant-CohenDivision of Immunology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Faris JaberDivision of Immunology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Jia-Shu YangDivision of Rheumatology, Inflammation and Immunity, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Tobias C WaltherDepartment of Genetics and Complex Diseases and Department of Molecular Metabolism, Harvard T.H. Chan School of Public Health, Boston, Massachusetts, USA.
Jordan S OrangeDivision of Immunogenetics, Department of Pediatrics, Morgan Stanley Children's Hospital of New York Presbyterian, Columbia University Irving Medical Center, New York, New York, USA.
Chitong RaoDivision of Infectious Diseases, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Seth Rakoff-NahoumDivision of Infectious Diseases, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Maria TsokosDepartment of Medicine, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts, USA.
Shafiq Ur Rehman NaseemDepartment of Child Health, Sultan Qaboos University Hospital, Muscat, Oman.
Salem Al-TamemiDepartment of Child Health, Sultan Qaboos University Hospital, Muscat, Oman.
Janet ChouDivision of Immunology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Victor W HsuDivision of Rheumatology, Inflammation and Immunity, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Raif S GehaDivision of Immunology, Boston Children's Hospital, Harvard Medical School, Boston, Massachusetts, USA.
Boston Children's Hospital · USBrigham and Women's Hospital · USHarvard University · USMorgan Stanley Children's Hospital · USSultan Qaboos University Hospital · OMBeth Israel Deaconess Medical Center · USPohang University of Science and Technology · KR

Funding

MOLECULAR BASIS OF ALLERGIC AND IMMUNOLOGIC DISEASET32AI007512 · NIAID · CHILDREN'S HOSPITAL BOSTON · PI Janet Chou, Peter A Nigrovic · 1996 to 2026
$13.1M
GENETIC, IMMUNOLOGIC AND MECHANISTIC BASIS OF HUMAN NK CELL DEFICIENCYR01AI120989 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ORANGE, JORDAN SCOTT · 2016 to 2025
$7.7M
Mechanisms and Physiology of COPI TransportR37GM058615 · NIGMS · BRIGHAM AND WOMEN'S HOSPITAL · PI HSU, VICTOR W · 2016 to 2025
$6.0M
Mechanisms of Lipid Droplet Protein TargetingR01GM097194 · NIGMS · YALE UNIVERSITY · PI WALTHER, TOBIAS C · 2011 to 2024
$4.9M
Mechanisms of a Novel Combined Immunodeficiency Caused by a Homozygous Mutation in COPG1R01AI139633 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI GEHA, RAIF SALIM · 2018 to 2022
$3.1M
Novel mechanisms of T cell costimulation: the role of LRRC8A in T cell activationK08AI116979 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI CHOU, JANET · 2015 to 2019
$934k
NIAID NIH HHS K08 AI116979NIAID NIH HHS R01 AI120989NIAID NIH HHS R01 AI139633NIAID NIH HHS T32 AI007512NIGMS NIH HHS R01 GM097194NIGMS NIH HHS R37 GM058615
6 · The paper itself

Abstract

The coat protein I (COPI) complex mediates retrograde trafficking from the Golgi to the endoplasmic reticulum (ER). Five siblings with persistent bacterial and viral infections and defective humoral and cellular immunity had a homozygous p.K652E mutation in the γ1 subunit of COPI (γ1-COP). The mutation disrupts COPI binding to the KDEL receptor and impairs the retrieval of KDEL-bearing chaperones from the Golgi to the ER. Homozygous Copg1K652E mice had increased ER stress in activated T and B cells, poor antibody responses, and normal numbers of T cells that proliferated normally, but underwent increased apoptosis upon activation. Exposure of the mutants to pet store mice caused weight loss, lymphopenia, and defective T cell proliferation that recapitulated the findings in the patients. The ER stress-relieving agent tauroursodeoxycholic acid corrected the immune defects of the mutants and reversed the phenotype they acquired following exposure to pet store mice. This study establishes the role of γ1-COP in the ER retrieval of KDEL-bearing chaperones and thereby the importance of ER homeostasis in adaptive immunity.

Indexed as

Lymphocyte ActivationMutation, MissenseAmino Acid SubstitutionAnimalsApoptosisB-LymphocytesCoatomer ProteinEndoplasmic ReticulumEndoplasmic Reticulum StressGolgi ApparatusHumansMiceMice, Mutant StrainsReceptors, PeptideSevere Combined ImmunodeficiencyT-LymphocytesCoatomer ProteinCOPG1 protein, humanKDEL receptorReceptors, PeptideAdaptive immunityImmunology

Identifiers

PMID33529166
PMCPMC7843234
OpenAlexW3126431387

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.