Evidence map›Paper›PMID 33547301›Full record

SynthesisNature communications2021

Genome-wide association study of serum liver enzymes implicates diverse metabolic and liver pathology.

Vincent L Chen, Xiaomeng Du, Yanhua Chen, Annapurna Kuppa, Samuel K Handelman, Rishel B Vohnoutka, Patricia A Peyser, Nicholette D Palmer, Lawrence F Bielak, Brian Halligan and 1 more

Erratum issuedAbstract readMeta-Analysis
In one paragraph

Synthesis in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 72 papers, 6 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed, 6 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 6 syntheses or guidelines pooled it.

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12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Vincent L Chen *Division of Gastroenterology and Hepatology, University of Michigan Health System, Ann Arbor, MI, USA.ORCID http://orcid.org/0000-0002-0157-6066
Xiaomeng Du *Division of Gastroenterology and Hepatology, University of Michigan Health System, Ann Arbor, MI, USA.
Yanhua ChenDivision of Gastroenterology and Hepatology, University of Michigan Health System, Ann Arbor, MI, USA.
Annapurna KuppaDivision of Gastroenterology and Hepatology, University of Michigan Health System, Ann Arbor, MI, USA.
Samuel K HandelmanDivision of Gastroenterology and Hepatology, University of Michigan Health System, Ann Arbor, MI, USA.
Rishel B VohnoutkaDivision of Gastroenterology and Hepatology, University of Michigan Health System, Ann Arbor, MI, USA.
Patricia A PeyserDepartment of Epidemiology, University of Michigan School of Public Health, Ann Arbor, MI, USA.ORCID http://orcid.org/0000-0002-9717-8459
Nicholette D PalmerDepartment of Biochemistry, Wake Forest School of Medicine, Winston-Salem, NC, USA.ORCID http://orcid.org/0000-0001-8883-2511
Lawrence F BielakDepartment of Epidemiology, University of Michigan School of Public Health, Ann Arbor, MI, USA.ORCID http://orcid.org/0000-0002-3443-8030
Brian HalliganDivision of Gastroenterology and Hepatology, University of Michigan Health System, Ann Arbor, MI, USA.ORCID http://orcid.org/0000-0002-9553-4253
Elizabeth K SpeliotesDivision of Gastroenterology and Hepatology, University of Michigan Health System, Ann Arbor, MI, USA. espeliot@med.umich.edu.

Funding

Training in Basic and Translational Digestive SciencesT32DK094775 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI JOHN Y KAO, LINDA C. SAMUELSON · 2012 to 2026
$3.6M
Human population based genetic studies to elucidate the biology of NAFLDR01DK107904 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SPELIOTES, ELIZABETH K · 2016 to 2020
$3.4M
Identification and functional impact of NAFLD associated genetic variantsR01DK106621 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SPELIOTES, ELIZABETH K · 2015 to 2019
$3.3M
NIDDK NIH HHS R01 DK106621NIDDK NIH HHS R01 DK107904NIDDK NIH HHS T32 DK094775
6 · The paper itself

Abstract

Serum liver enzyme concentrations are the most frequently-used laboratory markers of liver disease, a major cause of mortality. We conduct a meta-analysis of genome-wide association studies of liver enzymes from UK BioBank and BioBank Japan. We identified 160 previously-unreported independent alanine aminotransferase, 190 aspartate aminotransferase, and 199 alkaline phosphatase genome-wide significant associations, with some affecting multiple different enzymes. Associated variants implicate genes that demonstrate diverse liver cell type expression and promote a range of metabolic and liver diseases. These findings provide insight into the pathophysiology of liver and other metabolic diseases that are associated with serum liver enzyme concentrations.

Indexed as

Genome, HumanAlanine TransaminaseAlkaline PhosphataseAspartate AminotransferasesBiological Specimen BanksEndothelial CellsGene Expression RegulationGenome-Wide Association StudyHepatocytesHumansJapanKiller Cells, NaturalKupffer CellsLiverLiver DiseasesQuantitative Trait, HeritableAlanine TransaminaseAlkaline PhosphataseAspartate Aminotransferases

Identifiers

PMID33547301
PMCPMC7865025

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.