Evidence map›Paper›PMID 33557293›Full record

ArticleCells2021

Light-Dependent Translation Change of Arabidopsis

Piotr Gawroński, Christel Enroth, Peter Kindgren, Sebastian Marquardt, Stanisław Karpiński, Dario Leister, Poul Erik Jensen, Jeppe Vinther, Lars B Scharff

Open access · goldAbstract read
In one paragraph

Article in Cells, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

  1. Identification of Key Differentially Expressed Genes inInternational journal of molecular sciences · 2025
    Pooled it
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Recent advances in RNA structurome.Science China. Life sciences · 2022
    Review
  10. ProbingFrontiers in plant science · 2022
    Article
  11. Review
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Piotr GawrońskiDepartment of Plant Genetics, Breeding and Biotechnology, Institute of Biology, Warsaw University of Life Sciences, Nowoursynowska 159, 02-776 Warsaw, Poland.ORCID 0000-0002-9773-3109
Christel EnrothDepartment of Biology, Section for Computational and RNA Biology, University of Copenhagen, Ole Maaløes Vej 5, 2200 København N, Denmark.ORCID 0000-0003-4204-5234
Peter KindgrenCopenhagen Plant Science Centre, Department of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark.
Sebastian MarquardtCopenhagen Plant Science Centre, Department of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark.ORCID 0000-0003-1709-2717
Stanisław KarpińskiDepartment of Plant Genetics, Breeding and Biotechnology, Institute of Biology, Warsaw University of Life Sciences, Nowoursynowska 159, 02-776 Warsaw, Poland.
Dario LeisterPlant Molecular Biology, Department Biology I, Ludwig-Maximilians-University Munich, Großhadernerstr. 2-4, 82152 Planegg-Martinsried, Germany.ORCID 0000-0003-1897-8421
Poul Erik JensenDepartment of Food Science, University of Copenhagen, Rolighedsvej 26, 1958 Frederiksberg C, Denmark.ORCID 0000-0001-6524-7723
Jeppe VintherDepartment of Biology, Section for Computational and RNA Biology, University of Copenhagen, Ole Maaløes Vej 5, 2200 København N, Denmark.
Lars B ScharffCopenhagen Plant Science Centre, Department of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark.ORCID 0000-0003-0210-3428
University of Copenhagen · DKWarsaw University of Life Sciences · PLLudwig-Maximilians-Universität München · DE

Funding

Danmarks Frie Forskningsfond 7014-00322BDeutsche Forschungsgemeinschaft TR175H2020 European Research Council StG2017-757411H2020 Marie Skłodowska-Curie Actions MSCA-IF 703085Narodowe Centrum Nauki 2014/14/A/NZ1/00218Narodowe Centrum Nauki UMO-2016/23/D/NZ3/02491Novo Nordisk Fonden NNF15OC0014202Villum Fonden 13363
6 · The paper itself

Abstract

mRNA secondary structure influences translation. Proteins that modulate the mRNA secondary structure around the translation initiation region may regulate translation in plastids. To test this hypothesis, we exposed

Indexed as

LightPeptide Chain Initiation, Translational5' Untranslated RegionsArabidopsisArabidopsis ProteinsNucleic Acid ConformationPhotosynthesisPhotosystem II Protein ComplexProtein BindingRNA, MessengerRNA, Plant5' Untranslated RegionsArabidopsis ProteinsPhotosystem II Protein ComplexpsbA protein, ArabidopsisRNA, MessengerRNA, PlantArabidopsis thalianachloroplast translationgene expressionhigh lightmRNA secondary structureplastidregulationRNA structure probing

Identifiers

PMID33557293
PMCPMC7914831
OpenAlexW3127660371

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.