Evidence map›Paper›PMID 33565047›Full record

ArticleMolecular biotechnology2021

Cell-Free Expression of a Plant Membrane Protein BrPT2 From Boesenbergia Rotunda.

Yvonne Jing Mei Liew, Yean Kee Lee, Norzulaani Khalid, Noorsaadah Abd Rahman, Boon Chin Tan

Abstract read
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In one paragraph

Article in Molecular biotechnology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Complete chloroplast genome ofRevista brasileira de botanica : Brazilian journal of botany · 2022
    Article
  3. Review
  4. Phenolic Compounds and Flavonoids in Various Extracts ofIranian journal of pharmaceutical research : IJPR
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Yvonne Jing Mei LiewInstitute of Biological Sciences, Faculty of Science, University of Malaya, 50603, Kuala Lumpur, Malaysia.
Yean Kee LeeDrug Design and Development Research Group (DDDRG), Department of Chemistry, Faculty of Science, University of Malaya, 50603, Kuala Lumpur, Malaysia.
Norzulaani KhalidInstitute of Biological Sciences, Faculty of Science, University of Malaya, 50603, Kuala Lumpur, Malaysia.
Noorsaadah Abd RahmanDrug Design and Development Research Group (DDDRG), Department of Chemistry, Faculty of Science, University of Malaya, 50603, Kuala Lumpur, Malaysia.
Boon Chin TanCenter for Research in Biotechnology for Agriculture (CEBAR), University of Malaya, 50603, Kuala Lumpur, Malaysia. boonchin@um.edu.my.ORCID http://orcid.org/0000-0001-8503-9569
University of Malaya · MY

Funding

Fundamental Research Grant Scheme FP034-2018AFundamental Research Grant Scheme FP044-2016Fundamental Research Grant Scheme FP065-2018AInstitut Pengurusan dan Pemantauan Penyelidikan, Universiti Malaya PG073-2016AMalaysia Toray Science Foundation PV022-2016
6 · The paper itself

Abstract

Prenylation of aromatic natural products by membrane-bound prenyltransferases (PTs) is an important biosynthesis step of many bioactive compounds. At present, only a few plant flavonoid-related PT genes have been functionally characterized, mainly due to the difficulties of expressing these membrane proteins. Rapid and effective methods to produce functional plant membrane proteins are thus indispensable. Here, we evaluated expression systems through cell-based and cell-free approaches to express Boesenbergia rotunda BrPT2 encoding a membrane-bound prenyltransferase. We attempted to express BrPT2 in Escherichia coli and tobacco plants but failed to detect this protein using the Western-blot technique, whereas an intact single band of 43 kDa was detected when BrPT2 was expressed using a cell-free protein synthesis system (PURE). Under in vitro enzymatic condition, the synthesized BrPT2 successfully catalyzed pinostrobin chalcone to pinostrobin. Molecular docking analysis showed that pinostrobin chalcone interacts with BrPT2 at two cavities: (1) the main binding site at the central cavity and (2) the allosteric binding site located away from the central cavity. Our findings suggest that cell-free protein synthesis could be an alternative for rapid production of valuable difficult-to-express membrane proteins.

Indexed as

Binding SitesCell-Free SystemDimethylallyltranstransferaseFlavanonesGene ExpressionMembrane ProteinsModels, MolecularMolecular Docking SimulationMolecular WeightPlant ProteinsProtein ConformationZingiberaceaeDimethylallyltranstransferaseFlavanonesMembrane ProteinspinostrobinPlant ProteinsIn vitro synthesisLiposomeMembrane proteinsPinostrobinPrenyltransferase

Identifiers

PMID33565047
OpenAlexW3127040076

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.