Evidence map›Paper›PMID 33631273›Full record

ArticleNeurobiology of disease2021

INPP5D expression is associated with risk for Alzheimer's disease and induced by plaque-associated microglia.

Andy P Tsai, Peter Bor-Chian Lin, Chuanpeng Dong, Miguel Moutinho, Brad T Casali, Yunlong Liu, Bruce T Lamb, Gary E Landreth, Adrian L Oblak, Kwangsik Nho

Open access · goldAbstract read
In one paragraph

Article in Neurobiology of disease, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed, 1 pooled it
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 1 synthesis or guideline pooled it, 107 citations in OpenAlex.

  1. Pooled it
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  5. Review
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  7. Sex and life experience shape locus coeruleus pretangle tau pathology.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2026
    Article
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14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Andy P TsaiStark Neurosciences Research Institute, IUSM, Indianapolis, IN, USA. Electronic address: tandy@iu.edu.
Peter Bor-Chian LinStark Neurosciences Research Institute, IUSM, Indianapolis, IN, USA. Electronic address: pblin@iu.edu.
Chuanpeng DongDepartment of Medical and Molecular Genetics, Center for Computational Biology and Bioinformatics, IUSM, Indianapolis, IN, USA. Electronic address: cpdong@iu.edu.
Miguel MoutinhoStark Neurosciences Research Institute, IUSM, Indianapolis, IN, USA. Electronic address: mmoutinh@iu.edu.
Brad T CasaliStark Neurosciences Research Institute, IUSM, Indianapolis, IN, USA; Department of Neurosciences, Case Western Reserve University, School of Medicine, Cleveland, OH, USA. Electronic address: btc8@case.edu.
Yunlong LiuDepartment of Medical and Molecular Genetics, Center for Computational Biology and Bioinformatics, IUSM, Indianapolis, IN, USA. Electronic address: yunliu@iu.edu.
Bruce T LambStark Neurosciences Research Institute, IUSM, Indianapolis, IN, USA; Department of Medical and Molecular Genetics, IUSM, Indianapolis, IN, USA. Electronic address: btlamb@iu.edu.
Gary E LandrethStark Neurosciences Research Institute, IUSM, Indianapolis, IN, USA; Department of Anatomy and Cell Biology, IUSM, Indianapolis, IN, USA. Electronic address: glandret@iu.edu.
Adrian L OblakStark Neurosciences Research Institute, IUSM, Indianapolis, IN, USA; Department of Radiology & Imaging Sciences, IUSM, Indianapolis, IN, USA. Electronic address: aoblak@iupui.edu.
Kwangsik NhoDepartment of Radiology & Imaging Sciences, IUSM, Indianapolis, IN, USA. Electronic address: knho@iupui.edu.
Indiana University – Purdue University Indianapolis · USNeurosciences Institute · US

Funding

The IU/JAX Alzheimer's Disease Precision Models Center: Rat F344U54AG054345 · NIA · INDIANA UNIVERSITY INDIANAPOLIS · PI Gregory W Carter · 2016 to 2026
$95.6M
TREAT AD Structural Biology CoreU54AG065187 · NIA · EMORY UNIVERSITY · PI Gregory W Carter, ALLAN I LEVEY · 2019 to 2026
$69.7M
Central and Peripheral Roles of TREM2 in Alzheimer's DiseaseRF1AG051495 · NIA · INDIANA UNIVERSITY INDIANAPOLIS · PI LAMB, BRUCE T, LANDRETH, GARY E. · 2015 to 2015
$3.6M
Actions of Nuclear Receptors on TREM2+ myeloid cells and microglia in AD brainRF1AG050597 · NIA · INDIANA UNIVERSITY INDIANAPOLIS · PI LANDRETH, GARY E. · 2016 to 2016
$2.0M
Integrating Neuroimaging, Multi-omics, and Clinical Data in Complex DiseaseR01LM012535 · NLM · INDIANA UNIVERSITY INDIANAPOLIS · PI NHO, KWANGSIK TIMOTHY · 2017 to 2021
$1.7M
Integration of Bio-, Medical, and Imaging Informatics for Complex DiseasesR00LM011384 · NLM · INDIANA UNIVERSITY INDIANAPOLIS · PI NHO, KWANGSIK TIMOTHY · 2013 to 2015
$647k
In vivo assessment of the role of neurons and glia in tau propagationK01AG054753 · NIA · INDIANA UNIVERSITY INDIANAPOLIS · PI OBLAK, ADRIAN LYNN · 2017 to 2021
$625k
Integrative analysis of alternative splicing in Alzheimer's diseaseR03AG063250 · NIA · UNIVERSITY OF UTAH · PI LEE, YOUNGHEE · 2019 to 2020
$323k
Integration of Bio-, Medical, and Imaging Informatics for Complex DiseasesK99LM011384 · NLM · INDIANA UNIVERSITY INDIANAPOLIS · PI NHO, KWANGSIK TIMOTHY · 2012 to 2012
$90k
NIA NIH HHS K01 AG054753NIA NIH HHS R03 AG063250NIA NIH HHS RF1 AG050597NIA NIH HHS RF1 AG051495NIA NIH HHS U54 AG054345NIA NIH HHS U54 AG065187NLM NIH HHS K99 LM011384NLM NIH HHS R00 LM011384NLM NIH HHS R01 LM012535
6 · The paper itself

Abstract

Alzheimer's disease (AD) is a progressive neurodegenerative disorder characterized by cognitive decline, robust microgliosis, neuroinflammation, and neuronal loss. Genome-wide association studies recently highlighted a prominent role for microglia in late-onset AD (LOAD). Specifically, inositol polyphosphate-5-phosphatase (INPP5D), also known as SHIP1, is selectively expressed in brain microglia and has been reported to be associated with LOAD. Although INPP5D is likely a crucial player in AD pathophysiology, its role in disease onset and progression remains unclear. We performed differential gene expression analysis to investigate INPP5D expression in AD and its association with plaque density and microglial markers using transcriptomic (RNA-Seq) data from the Accelerating Medicines Partnership for Alzheimer's Disease (AMP-AD) cohort. We also performed quantitative real-time PCR, immunoblotting, and immunofluorescence assays to assess INPP5D expression in the 5xFAD amyloid mouse model. Differential gene expression analysis found that INPP5D expression was upregulated in LOAD and positively correlated with amyloid plaque density. In addition, in 5xFAD mice, Inpp5d expression increased as the disease progressed, and selectively in plaque-associated microglia. Increased Inpp5d expression levels in 5xFAD mice were abolished entirely by depleting microglia with the colony-stimulating factor receptor-1 antagonist PLX5622. Our findings show that INPP5D expression increases as AD progresses, predominantly in plaque-associated microglia. Importantly, we provide the first evidence that increased INPP5D expression might be a risk factor in AD, highlighting INPP5D as a potential therapeutic target. Moreover, we have shown that the 5xFAD mouse model is appropriate for studying INPP5D in AD.

Indexed as

AgedAged, 80 and overAlzheimer DiseaseAnimalsFemaleHumansMaleMiceMice, TransgenicMicrogliaPhosphatidylinositol-3,4,5-Trisphosphate 5-PhosphatasesPlaque, AmyloidRNA, MessengerRNA-SeqINPP5D protein, humanInpp5d protein, mousePhosphatidylinositol-3,4,5-Trisphosphate 5-PhosphatasesRNA, MessengerAD riskAlzheimer's disease (AD)INPP5DMicrogliaPlaque

Identifiers

PMID33631273
PMCPMC8082515
OpenAlexW3130754838

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.