Evidence map›Paper›PMID 33784744›Full record

ArticleMolecular biology and evolution2021

Demographic History, Adaptation, and NRAP Convergent Evolution at Amino Acid Residue 100 in the World Northernmost Cattle from Siberia.

Laura Buggiotti, Andrey A Yurchenko, Nikolay S Yudin, Christy J Vander Jagt, Nadezhda V Vorobieva, Mariya A Kusliy, Sergei K Vasiliev, Andrey N Rodionov, Oksana I Boronetskaya, Natalia A Zinovieva and 3 more

Open access · goldAbstract readComparative Study
In one paragraph

Article in Molecular biology and evolution, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
9.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 64 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 9 institutions in 3 countries.

Laura BuggiottiRoyal Veterinary College, University of London, London, United Kingdom.
Andrey A YurchenkoThe Federal Research Center Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences (ICG SB RAS), Novosibirsk, Russia.
Nikolay S YudinThe Federal Research Center Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences (ICG SB RAS), Novosibirsk, Russia.
Christy J Vander JagtAgriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, Australia.
Nadezhda V VorobievaDepartment of the Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology SB RAS, Novosibirsk, Russia.
Mariya A KusliyDepartment of the Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology SB RAS, Novosibirsk, Russia.
Sergei K VasilievPaleometal Archeology Department, Institute of Archaeology and Ethnography SB RAS, Novosibirsk, Russia.
Andrey N RodionovL.K. Ernst Federal Research Centre for Animal Husbandry, Podolsk, Russia.
Oksana I BoronetskayaMoscow Agrarian Academy, Timiryazev Russian State Agrarian University, Moscow, Russia.
Natalia A ZinovievaL.K. Ernst Federal Research Centre for Animal Husbandry, Podolsk, Russia.
Alexander S GraphodatskyDepartment of the Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology SB RAS, Novosibirsk, Russia.
Hans D DaetwylerAgriculture Victoria, AgriBio, Centre for AgriBioscience, Bundoora, VIC, Australia.
Denis M LarkinRoyal Veterinary College, University of London, London, United Kingdom.
Institute of Molecular and Cell Biology · RUFederal Scientific Center for Animal Husbandry named after Academician L.K. Ernst · RUInstitute of Cytology and Genetics · RUAgriculture Victoria · AUInstitute of Archaeology and Ethnography · RULa Trobe University · AUMoscow State Agroengineering University named after V.P. Goryachkin · RURoyal Veterinary College · GBSiberian Branch of the Russian Academy of Sciences · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Native cattle breeds represent an important cultural heritage. They are a reservoir of genetic variation useful for properly responding to agriculture needs in the light of ongoing climate changes. Evolutionary processes that occur in response to extreme environmental conditions could also be better understood using adapted local populations. Herein, different evolutionary histories of the world northernmost native cattle breeds from Russia were investigated. They highlighted Kholmogory as a typical taurine cattle, whereas Yakut cattle separated from European taurines approximately 5,000 years ago and contain numerous ancestral and some novel genetic variants allowing their adaptation to harsh conditions of living above the Polar Circle. Scans for selection signatures pointed to several common gene pathways related to adaptation to harsh climates in both breeds. But genes affected by selection from these pathways were mostly different. A Yakut cattle breed-specific missense mutation in a highly conserved NRAP gene represents a unique example of a young amino acid residue convergent change shared with at least 16 species of hibernating/cold-adapted mammals from six distinct phylogenetic orders. This suggests a convergent evolution event along the mammalian phylogenetic tree and fast fixation in a single isolated cattle population exposed to a harsh climate.

Indexed as

Biological EvolutionSelection, GeneticAcclimatizationAnimalsCattleGenetic IntrogressionGenomeMuscle ProteinsMutation, MissensePolymorphism, Single NucleotidePopulation DensityMuscle Proteinscold adaptationconvergent evolutionKholmogory cattleNRAPresequencingYakut cattle

Identifiers

PMID33784744
PMCPMC8321547
OpenAlexW3149720954

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.