Evidence map›Paper›PMID 33791444›Full record

ArticleCurrent opinion in systems biology2019

Order by chance: origins and benefits of stochasticity in immune cell fate control.

Kathleen Abadie, Nicholas A Pease, Matthew J Wither, Hao Yuan Kueh

Open access · greenAbstract read
In one paragraph

Article in Current opinion in systems biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Kathleen AbadieDepartment of Bioengineering, University of Washington.
Nicholas A PeaseDepartment of Bioengineering, University of Washington.
Matthew J WitherDepartment of Bioengineering, University of Washington.
Hao Yuan KuehDepartment of Bioengineering, University of Washington.
University of Washington · US

Funding

A chromatin-based timer controlling T-cell developmentR01HL146478 · NHLBI · UNIVERSITY OF WASHINGTON · PI KUEH, HAO YUAN · 2020 to 2024
$1.9M
Single-cell analysis of immune cell fate decision makingR00HL119638 · NHLBI · UNIVERSITY OF WASHINGTON · PI KUEH, HAO YUAN · 2016 to 2018
$747k
Input encoding in T-cell receptor signalingR21EB027327 · NIBIB · UNIVERSITY OF WASHINGTON · PI KUEH, HAO YUAN · 2019 to 2021
$622k
NHLBI NIH HHS R00 HL119638NHLBI NIH HHS R01 HL146478NIBIB NIH HHS R21 EB027327
6 · The paper itself

Abstract

To protect against diverse challenges, the immune system must continuously generate an arsenal of specialized cell types, each of which can mount a myriad of effector responses upon detection of potential threats. To do so, it must generate multiple differentiated cell populations with defined sizes and proportions, often from rare starting precursor cells. Here, we discuss the emerging view that inherently probabilistic mechanisms, involving rare, rate-limiting regulatory events in single cells, control fate decisions and population sizes and fractions during immune development and function. We first review growing evidence that key fate control points are gated by stochastic signaling and gene regulatory events that occur infrequently over decision-making timescales, such that initially homogeneous cells can adopt variable outcomes in response to uniform signals. We next discuss how such stochastic control can provide functional capabilities that are harder to achieve with deterministic control strategies, and may be central to robust immune system function.

Identifiers

PMID33791444
PMCPMC8009491
OpenAlexW2986212995

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.