Evidence map›Paper›PMID 33806609›Full record

ArticleBiomolecules2021

Parallel Multi-Omics in High-Risk Subjects for the Identification of Integrated Biomarker Signatures of Type 1 Diabetes.

Oscar Alcazar, Luis F Hernandez, Ernesto S Nakayasu, Carrie D Nicora, Charles Ansong, Michael J Muehlbauer, James R Bain, Ciara J Myer, Sanjoy K Bhattacharya, Peter Buchwald and 1 more

Open access · goldAbstract read
In one paragraph

Article in Biomolecules, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Observational
  7. Article
  8. Review
  9. Illuminating diabetesWorld journal of diabetes · 2025
    Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. Application of Metabolomics in Various Types of Diabetes.Diabetes, metabolic syndrome and obesity : targets and therapy · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Oscar AlcazarDiabetes Research Institute, University of Miami Miller School of Medicine, Miami, FL 33136, USA.
Luis F HernandezDiabetes Research Institute, University of Miami Miller School of Medicine, Miami, FL 33136, USA.
Ernesto S NakayasuBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354, USA.ORCID 0000-0002-4056-2695
Carrie D NicoraBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354, USA.
Charles AnsongBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99354, USA.
Michael J MuehlbauerDuke Molecular Physiology Institute, Duke University Medical Center, Durham, NC 27701, USA.
James R BainDuke Molecular Physiology Institute, Duke University Medical Center, Durham, NC 27701, USA.ORCID 0000-0002-8917-9187
Ciara J MyerDepartment of Ophthalmology, University of Miami Miller School of Medicine, Miami, FL 33136, USA.
Sanjoy K BhattacharyaDepartment of Ophthalmology, University of Miami Miller School of Medicine, Miami, FL 33136, USA.
Peter BuchwaldDiabetes Research Institute, University of Miami Miller School of Medicine, Miami, FL 33136, USA.ORCID 0000-0003-2732-8180
Midhat H AbdulredaDiabetes Research Institute, University of Miami Miller School of Medicine, Miami, FL 33136, USA.ORCID 0000-0002-0146-5876
University of Miami · USPacific Northwest National Laboratory · USDuke Medical Center · US

Funding

Resource Core 3 - Metabolomics CoreP30AG028716 · NIA · DUKE UNIVERSITY · PI CATHLEEN S COLON-EMERIC, Susan Nicole Hastings · 2006 to 2026
$24.6M
Shared Equipment ModuleP30EY014801 · NEI · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI Victor L Perez · 2004 to 2026
$12.2M
Pilot & Feasibility ProgramP30DK124723 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI P Darrell Neufer · 2020 to 2026
$11.0M
Predicting Newborn and Childhood Adiposity: An Integrated Omics ApproachR01DK117491 · NIDDK · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LOWE, WILLIAM L, SCHOLTENS, DENISE M · 2018 to 2022
$2.8M
Aptamer chimeras for the in vivo modulation of beta cell mass and immunogenicityUC4DK116241 · NIDDK · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI ABDULREDA, MIDHAT H, SERAFINI, PAOLO · 2017 to 2017
$2.0M
Role of macrophages in pancreatic islet graft rejectionK01DK097194 · NIDDK · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI ABDULREDA, MIDHAT H · 2013 to 2015
$415k
Mechanisms of islet transplant immune toleranceR56AI130330 · NIAID · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI ABDULREDA, MIDHAT H · 2017 to 2017
$384k
NEI NIH HHS EY14801NIAID NIH HHS R56 AI130330NIA NIH HHS P30 AG028716NIDDK NIH HHS K01 DK097194NIDDK NIH HHS P30 DK124723NIDDK NIH HHS R01 DK117491NIDDK NIH HHS UC4 DK116241
6 · The paper itself

Abstract

backgroundBiomarkers are crucial for detecting early type-1 diabetes (T1D) and preventing significant β-cell loss before the onset of clinical symptoms. Here, we present proof-of-concept studies to demonstrate the potential for identifying integrated biomarker signature(s) of T1D using parallel multi-omics.

methodsBlood from human subjects at high risk for T1D (and healthy controls;

resultsThe final quadra-omics dataset contained 2292 proteins, 328 miRNAs, 75 metabolites, and 41 lipids that were detected in all samples without exception. Disease/function enrichment analyses consistently indicated increased activation, proliferation, and migration of CD4 T-lymphocytes and macrophages. Integrated molecular network predictions highlighted central involvement and activation of NF-κB, TGF-β, VEGF, arachidonic acid, and arginase, and inhibition of miRNA Let-7a-5p. IPA-predicted candidate biomarkers were used to construct a putative integrated signature containing several miRNAs and metabolite/lipid features in the at-risk subjects.

conclusionsPreliminary parallel quadra-omics provided a comprehensive picture of disturbances in high-risk T1D subjects and highlighted the potential for identifying associated integrated biomarker signatures. With further development and validation in larger cohorts, parallel multi-omics could ultimately facilitate the classification of T1D progressors from non-progressors.

Indexed as

BiomarkersDiabetes Mellitus, Type 1GenomicsHumansMetabolomicsMicroRNAsProteomicsSoftwareBiomarkersMicroRNAsbiomarkersbiomarker signaturediagnosisearly predictionintegrated analysislipidomicsmetabolomicsmulti-omicsnetwork predictionomicsprognosisproteomicssignaling pathwaystranscriptomicstype 1 diabetes

Identifiers

PMID33806609
PMCPMC7999903
OpenAlexW3134868171

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.