Evidence map›Paper›PMID 33854239›Full record

ArticleNature2021

The AMBRA1 E3 ligase adaptor regulates the stability of cyclin D.

Andrea C Chaikovsky, Chuan Li, Edwin E Jeng, Samuel Loebell, Myung Chang Lee, Christopher W Murray, Ran Cheng, Janos Demeter, Danielle L Swaney, Si-Han Chen and 20 more

Open access · bronzeAbstract read
In one paragraph

Article in Nature, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 117 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
117citing papers in PubMed, 1 pooled it
9.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

117 citing papers in PubMed, 1 synthesis or guideline pooled it, 156 citations in OpenAlex.

  1. Pooled it
  2. Phase II Study of Palbociclib (PD-0332991) in CCND1, 2, or 3 Amplification: Results from the NCI-MATCH ECOG-ACRIN Trial (EAY131) Subprotocol Z1B.Clinical cancer research : an official journal of the American Association for Cancer Research · 2023
    Trial
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  14. CRL4EMBO reports · 2026
    Article
  15. Review
  16. Article
  17. A proteome-wide dependency map of protein interaction motifs.Nature structural & molecular biology · 2026
    Article
  18. Article
  19. Article
  20. Article

57 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors at 4 institutions in 1 country.

Andrea C ChaikovskyDepartment of Pediatrics, Stanford University, Stanford, CA, USA.ORCID http://orcid.org/0000-0003-1842-5384
Chuan LiDepartment of Biology, Stanford University, Stanford, CA, USA.
Edwin E JengDepartment of Genetics, Stanford University, Stanford, CA, USA.
Samuel LoebellDepartment of Pediatrics, Stanford University, Stanford, CA, USA.
Myung Chang LeeDepartment of Pediatrics, Stanford University, Stanford, CA, USA.ORCID http://orcid.org/0000-0002-7051-5822
Christopher W MurrayDepartment of Genetics, Stanford University, Stanford, CA, USA.
Ran ChengDepartment of Biology, Stanford University, Stanford, CA, USA.ORCID http://orcid.org/0000-0002-7617-3018
Janos DemeterDepartment of Microbiology and Immunology, Stanford University, Stanford, CA, USA.ORCID http://orcid.org/0000-0002-7301-8055
Danielle L SwaneyDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, CA, USA.
Si-Han ChenDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0002-2890-9764
Billy W NewtonDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, CA, USA.
Jeffrey R JohnsonDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, CA, USA.
Alexandros P DrainasDepartment of Pediatrics, Stanford University, Stanford, CA, USA.
Yan Ting ShueDepartment of Pediatrics, Stanford University, Stanford, CA, USA.
Jose A SeoaneDepartment of Genetics, Stanford University, Stanford, CA, USA.ORCID http://orcid.org/0000-0002-3856-9177
Preethi SrinivasanDepartment of Genetics, Stanford University, Stanford, CA, USA.
Andy HeDepartment of Pediatrics, Stanford University, Stanford, CA, USA.
Akihiro YoshidaDepartment of Biochemistry, School of Medicine, Case Western Reserve University, Cleveland, OH, USA.
Susan Q HipkinsDepartment of Pediatrics, Stanford University, Stanford, CA, USA.
Edel McCreaDepartment of Pediatrics, Stanford University, Stanford, CA, USA.
Carson D PoltorackDepartment of Pediatrics, Stanford University, Stanford, CA, USA.
Nevan J KroganDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, CA, USA.ORCID http://orcid.org/0000-0003-4902-337X
J Alan DiehlDepartment of Biochemistry, School of Medicine, Case Western Reserve University, Cleveland, OH, USA.ORCID http://orcid.org/0000-0001-9854-5049
Christina KongDepartment of Pathology, Stanford University, Stanford, CA, USA.
Peter K JacksonDepartment of Microbiology and Immunology, Stanford University, Stanford, CA, USA.
Christina CurtisDepartment of Genetics, Stanford University, Stanford, CA, USA.ORCID http://orcid.org/0000-0003-0166-3802
Dmitri A PetrovDepartment of Biology, Stanford University, Stanford, CA, USA.
Michael C BassikDepartment of Genetics, Stanford University, Stanford, CA, USA.ORCID http://orcid.org/0000-0001-5185-8427
Monte M WinslowDepartment of Genetics, Stanford University, Stanford, CA, USA.ORCID http://orcid.org/0000-0002-5730-9573
Julien SageDepartment of Pediatrics, Stanford University, Stanford, CA, USA. julsage@stanford.edu.ORCID http://orcid.org/0000-0002-8928-9968
Stanford University · USGladstone Institutes · USCase Western Reserve University · USStanford Medicine · US

Funding

Supplement to Enhance Wellness and Resiliency in the Graduate EnvironmentT32GM007276 · NIGMS · STANFORD UNIVERSITY · PI MORRISON, ASHBY J. · 1985 to 2023
$32.9M
Leveraging innovative technologies in basic and clinical cancer researchT32CA009302 · NCI · STANFORD UNIVERSITY · PI LAURA D ATTARDI, Aaron M Newman · 1985 to 2026
$19.1M
X-ray Screening and Rapid Structure DeterminationP50AI150476 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FRANKEL, ALAN D · 2019 to 2021
$14.4M
Using Networks to Seed Hierarchical Whole-cell Models of CancerU54CA209891 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI IDEKER, TREY · 2017 to 2021
$10.9M
Genomics of rapid adaptation in the lab and in the wildR35GM118165 · NIGMS · STANFORD UNIVERSITY · PI Dmitri Petrov · 2016 to 2026
$8.3M
Investigating molecular and cellular mechanisms of SCLC development to identify novel therapeutic strategiesR35CA231997 · NCI · STANFORD UNIVERSITY · PI SAGE, JULIEN · 2019 to 2025
$6.2M
Nuclear Accumulation of D-type Cyclins and OncogenesisR01CA093237 · NCI · UNIVERSITY OF PENNSYLVANIA · PI DIEHL, JOHN ALAN · 2001 to 2022
$5.9M
Molecular basis of tumor suppression by Cdk4/6 inhibitionR01CA228413 · NCI · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI RUBIN, SETH MICHAEL, SAGE, JULIEN · 2019 to 2023
$1.8M
Mechanisms of Cell Cycle and Cell Identity Regulation that Influence Sensitivity to Targeted TherapiesF99CA245471 · NCI · STANFORD UNIVERSITY · PI CHAIKOVSKY, ANDREA CHRISTINE · 2019 to 2020
$78k
NCI NIH HHS F99 CA245471NCI NIH HHS R01 CA093237NCI NIH HHS R01 CA228413NCI NIH HHS R35 CA231997NCI NIH HHS T32 CA009302NCI NIH HHS U54 CA209891NIAID NIH HHS P50 AI150476NIGMS NIH HHS R35 GM118165NIGMS NIH HHS T32 GM007276
6 · The paper itself

Abstract

The initiation of cell division integrates a large number of intra- and extracellular inputs. D-type cyclins (hereafter, cyclin D) couple these inputs to the initiation of DNA replication

Indexed as

Adaptor Proteins, Signal TransducingAdenocarcinoma of LungAnimalsCell DivisionCyclin DCyclin-Dependent Kinase 4Cyclin-Dependent Kinase 6Genes, Tumor SuppressorHumansLung NeoplasmsMicePiperazinesPyridinesU937 CellsUbiquitinationAdaptor Proteins, Signal TransducingAMBRA1 protein, humanAmbra1 protein, mouseCyclin DCyclin-Dependent Kinase 4Cyclin-Dependent Kinase 6palbociclibPiperazinesPyridines

Identifiers

PMID33854239
PMCPMC8246597
OpenAlexW3155333011

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.