Evidence map›Paper›PMID 33858509›Full record

ArticleJournal of cheminformatics2021

QSAR-Co-X: an open source toolkit for multitarget QSAR modelling.

Amit Kumar Halder, M Natália Dias Soeiro Cordeiro

Abstract read
In one paragraph

Article in Journal of cheminformatics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. AI/ML-based computational models for toxicity prediction.Environmental science and pollution research international · 2026
    Review
  2. Article
  3. Article
  4. Article
  5. Nanotoxicology: developments and new insights.Nanomedicine (London, England) · 2025
    Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
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  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Amit Kumar HalderLAQV@REQUIMTE/Faculty of Sciences, University of Porto, 4169-007, Porto, Portugal. amit.halder@fc.up.pt.
M Natália Dias Soeiro CordeiroLAQV@REQUIMTE/Faculty of Sciences, University of Porto, 4169-007, Porto, Portugal. ncordeir@fc.up.pt.ORCID http://orcid.org/0000-0003-3375-8670

Funding

Fundação para a Ciência e a Tecnologia PTDC/QUI-QIN/30649/2017Fundação para a Ciência e a Tecnologia UID/QUI/50006/2020
6 · The paper itself

Abstract

Quantitative structure activity relationships (QSAR) modelling is a well-known computational tool, often used in a wide variety of applications. Yet one of the major drawbacks of conventional QSAR modelling is that models are set up based on a limited number of experimental and/or theoretical conditions. To overcome this, the so-called multitasking or multitarget QSAR (mt-QSAR) approaches have emerged as new computational tools able to integrate diverse chemical and biological data into a single model equation, thus extending and improving the reliability of this type of modelling. We have developed QSAR-Co-X, an open source python-based toolkit (available to download at https://github.com/ncordeirfcup/QSAR-Co-X ) for supporting mt-QSAR modelling following the Box-Jenkins moving average approach. The new toolkit embodies several functionalities for dataset selection and curation plus computation of descriptors, for setting up linear and non-linear models, as well as for a comprehensive results analysis. The workflow within this toolkit is guided by a cohort of multiple statistical parameters and graphical outputs onwards assessing both the predictivity and the robustness of the derived mt-QSAR models. To monitor and demonstrate the functionalities of the designed toolkit, four case-studies pertaining to previously reported datasets are examined here. We believe that this new toolkit, along with our previously launched QSAR-Co code, will significantly contribute to make mt-QSAR modelling widely and routinely applicable.

Indexed as

Feature selectionMachine learningMultitarget modelsQSARSoftware tools

Identifiers

PMID33858509
PMCPMC8048082

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.