Evidence map›Paper›PMID 33873056›Full record

ReviewEuropean journal of medicinal chemistry2021

AAA ATPases as therapeutic targets: Structure, functions, and small-molecule inhibitors.

Gang Zhang, Shan Li, Kai-Wen Cheng, Tsui-Fen Chou

Open access · greenAbstract readReview
In one paragraph

Review in European journal of medicinal chemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
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  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Differential roles of putative arginine fingers of AAAbioRxiv : the preprint server for biology · 2024
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
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  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Gang ZhangDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125, United States. Electronic address: gzhang2@caltech.edu.
Shan LiDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125, United States.
Kai-Wen ChengDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125, United States.
Tsui-Fen ChouDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125, United States. Electronic address: tfchou@caltech.edu.
California Institute of Technology · US

Funding

WORK ORDER 126643 B539 EXPAND IC SUITE75N91019D00024 · NIAID · LEIDOS BIOMEDICAL RESEARCH, INC. · PI BRISCOE, LYNN · 2019 to 2025
$3932.6M
Dysregulation of p97/VCP disease mutants in IBM and FTLD-UR01NS102279 · NINDS · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI CHOU, TSUI-FEN · 2018 to 2022
$2.8M
Cell adhesion mediated by LINKINR01HD086596 · NICHD · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI CHOU, TSUI-FEN, STERNBERG, PAUL WARREN · 2016 to 2020
$1.9M
Using HTS to Identify Inhibitors of R155H-p97/VCP Mutant to treat IBMPFD/ALSR01NS100815 · NINDS · LUNDQUIST INSTITUTE FOR BIOMEDICAL INNOVATION AT HARBOR-UCLA MEDICAL CENTER · PI CHOU, TSUI-FEN · 2017 to 2019
$1.0M
CCR NIH HHS HHSN261200800001CNCI NIH HHS 75N91019D00024NCI NIH HHS HHSN261200800001ENICHD NIH HHS R01 HD086596NINDS NIH HHS R01 NS100815NINDS NIH HHS R01 NS102279
6 · The paper itself

Abstract

ATPases Associated with Diverse Cellular Activity (AAA ATPase) are essential enzymes found in all organisms. They are involved in various processes such as DNA replication, protein degradation, membrane fusion, microtubule serving, peroxisome biogenesis, signal transduction, and the regulation of gene expression. Due to the importance of AAA ATPases, several researchers identified and developed small-molecule inhibitors against these enzymes. We discuss six AAA ATPases that are potential drug targets and have well-developed inhibitors. We compare available structures that suggest significant differences of the ATP binding pockets among the AAA ATPases with or without ligand. The distances from ADP to the His20 in the His-Ser-His motif and the Arg finger (Arg353 or Arg378) in both RUVBL1/2 complex structures bound with or without ADP have significant differences, suggesting dramatically different interactions of the binding site with ADP. Taken together, the inhibitors of six well-studied AAA ATPases and their structural information suggest further development of specific AAA ATPase inhibitors due to difference in their structures. Future chemical biology coupled with proteomic approaches could be employed to develop variant specific, complex specific, and pathway specific inhibitors or activators for AAA ATPase proteins.

Indexed as

ATPases Associated with Diverse Cellular ActivitiesBinding SitesCarbazolesHumansMolecular Dynamics SimulationNeoplasmsPyrazolesPyrimidinesQuinazolinesSmall Molecule LibrariesZearalenoneATPases Associated with Diverse Cellular ActivitiesCarbazolescurvularinPyrazolespyrazolo(3,4-d)pyrimidinePyrimidinesQuinazolinesSmall Molecule LibrariesZearalenoneAAA ATPasesATAD2p97RUVBL1/2Small molecule inhibitors

Identifiers

PMID33873056
PMCPMC8165034
OpenAlexW3152492976

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.