Evidence map›Paper›PMID 33895786›Full record

ArticleSignal transduction and targeted therapy2021

An integrative drug repositioning framework discovered a potential therapeutic agent targeting COVID-19.

Yiyue Ge, Tingzhong Tian, Suling Huang, Fangping Wan, Jingxin Li, Shuya Li, Xiaoting Wang, Hui Yang, Lixiang Hong, Nian Wu and 23 more

Open access · goldAbstract read
In one paragraph

Article in Signal transduction and targeted therapy, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 121 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
121citing papers in PubMed, 3 pooled it
21.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

121 citing papers in PubMed, 3 syntheses or guidelines pooled it, 202 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Artificial intelligence catalyzes antimicrobial peptide design.Synthetic and systems biotechnology · 2027
    Review
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  19. From Lab to Clinic: Success Stories of Repurposed Drugs in Treating Major Diseases.Advances in pharmacological and pharmaceutical sciences · 2025
    Review
  20. Review

61 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors at 10 institutions in 2 countries.

Yiyue Ge *Institute for Interdisciplinary Information Sciences, Tsinghua University, Beijing, China.ORCID http://orcid.org/0000-0002-4839-5334
Tingzhong Tian *Institute for Interdisciplinary Information Sciences, Tsinghua University, Beijing, China.ORCID http://orcid.org/0000-0003-4899-0632
Suling Huang *Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China.
Fangping Wan *Institute for Interdisciplinary Information Sciences, Tsinghua University, Beijing, China.
Jingxin Li *NHC Key laboratory of Enteric Pathogenic Microbiology, Jiangsu Provincial Center for Diseases Control and Prevention, Nanjing, Jiangsu Province, China.
Shuya LiInstitute for Interdisciplinary Information Sciences, Tsinghua University, Beijing, China.
Xiaoting WangSilexon AI Technology Co., Ltd., Nanjing, Jiangsu Province, China.
Hui YangSilexon AI Technology Co., Ltd., Nanjing, Jiangsu Province, China.
Lixiang HongInstitute for Interdisciplinary Information Sciences, Tsinghua University, Beijing, China.
Nian WuInstitute for Interdisciplinary Information Sciences, Tsinghua University, Beijing, China.
Enming YuanInstitute for Interdisciplinary Information Sciences, Tsinghua University, Beijing, China.
Yunan LuoDepartment of Computer Science, University of Illinois at Urbana-Champaign, Illinois, IL, USA.
Lili ChengSchool of Pharmaceutical Sciences, Tsinghua University, Beijing, China.
Chengliang HuSchool of Pharmaceutical Sciences, Tsinghua University, Beijing, China.
Yipin LeiSilexon AI Technology Co., Ltd., Nanjing, Jiangsu Province, China.
Hantao ShuInstitute for Interdisciplinary Information Sciences, Tsinghua University, Beijing, China.
Xiaolong FengSchool of Electronic Information and Communications, Huazhong University of Science and Technology, Wuhan, Hubei Province, China.
Ziyuan JiangDepartment of Automation, Tsinghua University, Beijing, China.
Yunfu WuInner Mongolia Alashan League Organization Establishment Committee Office Electronic Support Center, Alashan, Inner Mongolia, China.
Ying ChiNHC Key laboratory of Enteric Pathogenic Microbiology, Jiangsu Provincial Center for Diseases Control and Prevention, Nanjing, Jiangsu Province, China.
Xiling GuoNHC Key laboratory of Enteric Pathogenic Microbiology, Jiangsu Provincial Center for Diseases Control and Prevention, Nanjing, Jiangsu Province, China.
Lunbiao CuiNHC Key laboratory of Enteric Pathogenic Microbiology, Jiangsu Provincial Center for Diseases Control and Prevention, Nanjing, Jiangsu Province, China.
Liang XiaoConvalife (Shanghai) Co., Ltd., Shanghai, China.
Zeng LiConvalife (Shanghai) Co., Ltd., Shanghai, China.
Chunhao YangShanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China.
Zehong MiaoShanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China.ORCID http://orcid.org/0000-0002-0833-6583
Ligong ChenSchool of Pharmaceutical Sciences, Tsinghua University, Beijing, China.ORCID http://orcid.org/0000-0002-7893-7173
Haitao LiBeijing Advanced Innovation Center for Structural Biology, Tsinghua-Peking Joint Center for Life Sciences, Department of Basic Medical Sciences, School of Medicine, Tsinghua University, Beijing, China.ORCID http://orcid.org/0000-0002-6686-1677
Hainian ZengSilexon AI Technology Co., Ltd., Nanjing, Jiangsu Province, China.
Dan ZhaoInstitute for Interdisciplinary Information Sciences, Tsinghua University, Beijing, China. zhaodan2018@tsinghua.edu.cn.ORCID http://orcid.org/0000-0003-0195-6031
Fengcai ZhuNHC Key laboratory of Enteric Pathogenic Microbiology, Jiangsu Provincial Center for Diseases Control and Prevention, Nanjing, Jiangsu Province, China. jszfc@vip.sina.com.
Xiaokun ShenConvalife (Shanghai) Co., Ltd., Shanghai, China. steve.shen@convalife.com.
Jianyang ZengInstitute for Interdisciplinary Information Sciences, Tsinghua University, Beijing, China. zengjy321@tsinghua.edu.cn.ORCID http://orcid.org/0000-0003-0950-7716
Tsinghua University · CNJiangsu Provincial Center for Disease Control and Prevention · CNSilexon AI Technology (China) · CNChinese Academy of Sciences · CNConvalife (China) · CNCapital Medical University · CNCenter for Life Sciences · CNInner Mongolia Electric Power Survey & Design Institute (China) · CNTongji Hospital · CNUniversity of Illinois Urbana-Champaign · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The global spread of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) requires an urgent need to find effective therapeutics for the treatment of coronavirus disease 2019 (COVID-19). In this study, we developed an integrative drug repositioning framework, which fully takes advantage of machine learning and statistical analysis approaches to systematically integrate and mine large-scale knowledge graph, literature and transcriptome data to discover the potential drug candidates against SARS-CoV-2. Our in silico screening followed by wet-lab validation indicated that a poly-ADP-ribose polymerase 1 (PARP1) inhibitor, CVL218, currently in Phase I clinical trial, may be repurposed to treat COVID-19. Our in vitro assays revealed that CVL218 can exhibit effective inhibitory activity against SARS-CoV-2 replication without obvious cytopathic effect. In addition, we showed that CVL218 can interact with the nucleocapsid (N) protein of SARS-CoV-2 and is able to suppress the LPS-induced production of several inflammatory cytokines that are highly relevant to the prevention of immunopathology induced by SARS-CoV-2 infection.

Indexed as

Computer SimulationCOVID-19 Drug TreatmentDrug RepositioningModels, BiologicalAntiviral AgentsCOVID-19HumansSARS-CoV-2Antiviral Agents

Identifiers

PMID33895786
PMCPMC8065335
OpenAlexW3159592735

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.