Evidence map›Paper›PMID 33915014›Full record

ArticleAngewandte Chemie (International ed. in English)2021

Supramolecular Cylinders Target Bulge Structures in the 5' UTR of the RNA Genome of SARS-CoV-2 and Inhibit Viral Replication*.

Lazaros Melidis, Harriet J Hill, Nicholas J Coltman, Scott P Davies, Kinga Winczura, Tasha Chauhan, James S Craig, Aditya Garai, Catherine A J Hooper, Ross T Egan and 5 more

Open access · hybridAbstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Interactions of elongated dinuclear metallo-cylinders with DNA three-way and four-way junctions.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2025
    Article
  3. Article
  4. Supramolecular Recognition of a DNA Four-Way Junction by an MAngewandte Chemie (International ed. in English) · 2025
    Article
  5. Article
  6. Switching on Supramolecular DNA Junction Binding Using a Human Enzyme.Angewandte Chemie (International ed. in English) · 2025
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 2 countries.

Lazaros MelidisPhysical Sciences for Health Centre, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.ORCID 0000-0001-6853-2722
Harriet J HillInstitute of Immunology and Immunotherapy, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.ORCID 0000-0002-5620-0795
Nicholas J ColtmanSchool of Biosciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.ORCID 0000-0002-8210-9178
Scott P DaviesInstitute of Immunology and Immunotherapy, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.ORCID 0000-0001-6899-1339
Kinga WinczuraSchool of Biosciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.ORCID 0000-0003-2958-8728
Tasha ChauhanPhysical Sciences for Health Centre, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.
James S CraigPhysical Sciences for Health Centre, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.ORCID 0000-0001-6128-9117
Aditya GaraiSchool of Chemistry, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.ORCID 0000-0002-0972-5580
Catherine A J HooperSchool of Chemistry, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.
Ross T EganSchool of Chemistry, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.ORCID 0000-0001-7472-8545
Jane A McKeatingNuffield Department of Medicine & Chinese Academy of Medical Sciences (CAMS) Oxford Institute (COI), Oxford University, Oxford, OX3 7BN, UK.ORCID 0000-0002-7229-5886
Nikolas J HodgesSchool of Biosciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.ORCID 0000-0002-3306-7688
Zania StamatakiInstitute of Immunology and Immunotherapy, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.ORCID 0000-0003-3823-4497
Pawel GrzechnikSchool of Biosciences, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.ORCID 0000-0003-3355-1741
Michael J HannonPhysical Sciences for Health Centre, University of Birmingham, Edgbaston, Birmingham, B15 2TT, UK.ORCID 0000-0002-5797-6747
University of Birmingham · GBChinese Academy of Medical Sciences & Peking Union Medical College · CN

Funding

Biotechnology and Biological Sciences Research Council BB/M01116X/1Medical Research Council G0400802Medical Research Council G0801976Medical Research Council MR/R022011/1MRF MRF-169-0001-F-STAM-C0826MRF_ MRF-169-0001-F-STAM-C0826National Centre for the Replacement, Refinement and Reduction of Animals in Research NC/R002061/1Wellcome Trust 200838/Z/16/Z
6 · The paper itself

Abstract

The untranslated regions (UTRs) of viral genomes contain a variety of conserved yet dynamic structures crucial for viral replication, providing drug targets for the development of broad spectrum anti-virals. We combine in vitro RNA analysis with molecular dynamics simulations to build the first 3D models of the structure and dynamics of key regions of the 5' UTR of the SARS-CoV-2 genome. Furthermore, we determine the binding of metallo-supramolecular helicates (cylinders) to this RNA structure. These nano-size agents are uniquely able to thread through RNA junctions and we identify their binding to a 3-base bulge and the central cross 4-way junction located in stem loop 5. Finally, we show these RNA-binding cylinders suppress SARS-CoV-2 replication, highlighting their potential as novel anti-viral agents.

Indexed as

5' Untranslated RegionsAnimalsAntiviral AgentsChlorocebus aethiopsCoordination ComplexesGenome, ViralMacromolecular SubstancesMetals, HeavyMolecular Dynamics SimulationRNASARS-CoV-2Vero CellsVirus Replication5' Untranslated RegionsAntiviral AgentsCoordination ComplexesMacromolecular SubstancesMetals, HeavyRNAinhibitorsmetals in medicineRNA structuresSARS-CoV-2supramolecular chemistry

Identifiers

PMID33915014
PMCPMC8222931
OpenAlexW3157199547

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.