Evidence map›Paper›PMID 33934196›Full record

ReviewArchives of virology2021

Human gene polymorphisms and their possible impact on the clinical outcome of SARS-CoV-2 infection.

Seyed Mohammad Ali Hashemi, Marijn Thijssen, Seyed Younes Hosseini, Alijan Tabarraei, Mahmoud Reza Pourkarim, Jamal Sarvari

Abstract readReview
In one paragraph

Review in Archives of virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
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  4. Review
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  8. Review
  9. Role ofAfrican journal of laboratory medicine · 2024
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  12. Microorganisms · 2023
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  17. Molecular Study ofArchives of Razi Institute · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Seyed Mohammad Ali HashemiDepartment of Bacteriology and Virology, Shiraz University of Medical Sciences, Shiraz, Iran.
Marijn ThijssenLaboratory for Clinical and Epidemiological Virology, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, 3000, Leuven, Belgium.
Seyed Younes HosseiniDepartment of Bacteriology and Virology, Shiraz University of Medical Sciences, Shiraz, Iran.
Alijan TabarraeiInfectious Diseases Research Center, Golestan University of Medical Sciences, Gorgan, Iran.
Mahmoud Reza PourkarimLaboratory for Clinical and Epidemiological Virology, Department of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, 3000, Leuven, Belgium.
Jamal SarvariDepartment of Bacteriology and Virology, Shiraz University of Medical Sciences, Shiraz, Iran. sarvarij@sums.ac.ir.ORCID http://orcid.org/0000-0002-2259-0836

Funding

Shiraz University of Medical Sciences 22169
6 · The paper itself

Abstract

The SARS-CoV-2 pandemic has become one of the most serious health concerns globally. Although multiple vaccines have recently been approved for the prevention of coronavirus disease 2019 (COVID-19), an effective treatment is still lacking. Our knowledge of the pathogenicity of this virus is still incomplete. Studies have revealed that viral factors such as the viral load, duration of exposure to the virus, and viral mutations are important variables in COVID-19 outcome. Furthermore, host factors, including age, health condition, co-morbidities, and genetic background, might also be involved in clinical manifestations and infection outcome. This review focuses on the importance of variations in the host genetic background and pathogenesis of SARS-CoV-2. We will discuss the significance of polymorphisms in the ACE-2, TMPRSS2, vitamin D receptor, vitamin D binding protein, CD147, glucose-regulated protein 78 kDa, dipeptidyl peptidase-4 (DPP4), neuropilin-1, heme oxygenase, apolipoprotein L1, vitamin K epoxide reductase complex 1 (VKORC1), and immune system genes for the clinical outcome of COVID-19.

Indexed as

ABO Blood-Group SystemAngiotensin-Converting Enzyme 2Apolipoprotein L1BasiginCOVID-19Dipeptidyl Peptidase 4Endoplasmic Reticulum Chaperone BiPHeat-Shock ProteinsHeme Oxygenase-1HumansImmunityNeuropilin-1Patient Outcome AssessmentPolymorphism, GeneticReceptors, CalcitriolSARS-CoV-2ABO Blood-Group SystemACE2 protein, humanAngiotensin-Converting Enzyme 2APOL1 protein, humanApolipoprotein L1BasiginBSG protein, humanDipeptidyl Peptidase 4DPP4 protein, humanEndoplasmic Reticulum Chaperone BiPHeat-Shock ProteinsHeme Oxygenase-1HMOX1 protein, humanNeuropilin-1NRP1 protein, humanReceptors, CalcitriolSerine EndopeptidasesTMPRSS2 protein, humanVitamin D-Binding ProteinVitamin K Epoxide ReductasesVKORC1 protein, human

Identifiers

PMID33934196
PMCPMC8088757

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.