Evidence map›Paper›PMID 33946378›Full record

ArticleCells2021

Integrated microRNA and mRNA Expression Profiling Identifies Novel Targets and Networks Associated with Ebstein's Anomaly.

Masood Abu-Halima, Viktoria Wagner, Lea Simone Becker, Basim M Ayesh, Mohammed Abd El-Rahman, Ulrike Fischer, Eckart Meese, Hashim Abdul-Khaliq

Abstract read
In one paragraph

Article in Cells, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Masood Abu-HalimaInstitute of Human Genetics, Saarland University, 66421 Homburg/Saar, Germany.ORCID 0000-0001-9048-4958
Viktoria WagnerInstitute of Human Genetics, Saarland University, 66421 Homburg/Saar, Germany.ORCID 0000-0002-1957-0658
Lea Simone BeckerInstitute of Human Genetics, Saarland University, 66421 Homburg/Saar, Germany.
Basim M AyeshDepartment of Laboratory Medical Sciences, Alaqsa University, Gaza 4051, Palestine.ORCID 0000-0001-5905-9611
Mohammed Abd El-RahmanDepartment of Pediatric Cardiology, Saarland University Medical Center, 66421 Homburg/Saar, Germany.
Ulrike FischerInstitute of Human Genetics, Saarland University, 66421 Homburg/Saar, Germany.ORCID 0000-0002-7808-9565
Eckart MeeseInstitute of Human Genetics, Saarland University, 66421 Homburg/Saar, Germany.
Hashim Abdul-KhaliqDepartment of Pediatric Cardiology, Saarland University Medical Center, 66421 Homburg/Saar, Germany.

Funding

Competence Network for Congenital Heart Defects [Nr. 01GI0601 (2014)]Fördergemeinschaft Kinderherzen/Deutsche Herzstiftung 2021German Centre for Cardiovascular Research (DZHK) [Nr. 81X2800112 (2015)]Hedwig-Stalter-Stiftung 2016
6 · The paper itself

Abstract

Little is known about abundance level changes of circulating microRNAs (miRNAs) and messenger RNAs (mRNA) in patients with Ebstein's anomaly (EA). Here, we performed an integrated analysis to identify the differentially abundant miRNAs and mRNA targets and to identify the potential therapeutic targets that might be involved in the mechanisms underlying EA. A large panel of human miRNA and mRNA microarrays were conducted to determine the genome-wide expression profiles in the blood of 16 EA patients and 16 age and gender-matched healthy control volunteers (HVs). Differential abundance level of single miRNA and mRNA was validated by Real-Time quantitative PCR (RT-qPCR). Enrichment analyses of altered miRNA and mRNA abundance levels were identified using bioinformatics tools. Altered miRNA and mRNA abundance levels were observed between EA patients and HVs. Among the deregulated miRNAs and mRNAs, 76 miRNAs (49 lower abundance and 27 higher abundance, fold-change of ≥2) and 29 mRNAs (25 higher abundance and 4 lower abundance, fold-change of ≥1.5) were identified in EA patients compared to HVs. Bioinformatics analysis identified 37 pairs of putative miRNA-mRNA interactions. The majority of the correlations were detected between the lower abundance level of miRNA and higher abundance level of mRNA, except for let-7b-5p, which showed a higher abundance level and their target gene,

Indexed as

Gene Regulatory NetworksAdolescentAdultEbstein AnomalyFemaleHumansMaleMicroRNAsRNA, MessengerTranscriptomeMicroRNAsRNA, Messengercongenital heart defectEbstein’s anomalyintegration analysismicroRNAmRNA

Identifiers

PMID33946378
PMCPMC8146150

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.