Evidence map›Paper›PMID 33966634›Full record

ArticleGenome biology2021

HDAC4 degradation during senescence unleashes an epigenetic program driven by AP-1/p300 at selected enhancers and super-enhancers.

Eros Di Giorgio, Harikrishnareddy Paluvai, Emiliano Dalla, Liliana Ranzino, Alessandra Renzini, Viviana Moresi, Martina Minisini, Raffaella Picco, Claudio Brancolini

Open access · goldAbstract read
In one paragraph

Article in Genome biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 61 citations in OpenAlex.

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  11. HIFU-Driven Targeted Pyroptosis Therapy in Basal-Like Breast Cancer.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
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  14. The states of senescent cells.Biochemical Society transactions · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Eros Di GiorgioDepartment of Medicine, Università degli Studi di Udine, p.le Kolbe 4, 33100, Udine, Italy.
Harikrishnareddy PaluvaiDepartment of Medicine, Università degli Studi di Udine, p.le Kolbe 4, 33100, Udine, Italy.
Emiliano DallaDepartment of Medicine, Università degli Studi di Udine, p.le Kolbe 4, 33100, Udine, Italy.
Liliana RanzinoDepartment of Medicine, Università degli Studi di Udine, p.le Kolbe 4, 33100, Udine, Italy.
Alessandra RenziniDAHFMO Unit of Histology and Medical Embryology, Sapienza University of Rome, via Antonio Scarpa 16, 00161, Rome, Italy.
Viviana MoresiDAHFMO Unit of Histology and Medical Embryology, Sapienza University of Rome, via Antonio Scarpa 16, 00161, Rome, Italy.
Martina MinisiniDepartment of Medicine, Università degli Studi di Udine, p.le Kolbe 4, 33100, Udine, Italy.
Raffaella PiccoDepartment of Medicine, Università degli Studi di Udine, p.le Kolbe 4, 33100, Udine, Italy.
Claudio BrancoliniDepartment of Medicine, Università degli Studi di Udine, p.le Kolbe 4, 33100, Udine, Italy. claudio.brancolini@uniud.it.ORCID 0000-0002-6597-5373
University of Udine · ITSapienza University of Rome · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCellular senescence is a permanent state of replicative arrest defined by a specific pattern of gene expression. The epigenome in senescent cells is sculptured in order to sustain the new transcriptional requirements, particularly at enhancers and super-enhancers. How these distal regulatory elements are dynamically modulated is not completely defined.

resultsEnhancer regions are defined by the presence of H3K27 acetylation marks, which can be modulated by class IIa HDACs, as part of multi-protein complexes. Here, we explore the regulation of class IIa HDACs in different models of senescence. We find that HDAC4 is polyubiquitylated and degraded during all types of senescence and it selectively binds and monitors H3K27ac levels at specific enhancers and super-enhancers that supervise the senescent transcriptome. Frequently, these HDAC4-modulated elements are also monitored by AP-1/p300. The deletion of HDAC4 in transformed cells which have bypassed oncogene-induced senescence is coupled to the re-appearance of senescence and the execution of the AP-1/p300 epigenetic program.

conclusionsOverall, our manuscript highlights a role of HDAC4 as an epigenetic reader and controller of enhancers and super-enhancers that supervise the senescence program. More generally, we unveil an epigenetic checkpoint that has important consequences in aging and cancer.

Indexed as

Enhancer Elements, GeneticEpigenesis, GeneticGene Expression RegulationAcetylationCell Line, TumorCells, CulturedCellular SenescenceComputational BiologyE1A-Associated p300 ProteinFibroblastsGene Expression ProfilingGene Knockdown TechniquesHistone DeacetylasesHistonesHumansProteolysisE1A-Associated p300 ProteinEP300 protein, humanHDAC4 protein, humanHistone DeacetylasesHistonesRepressor ProteinsTranscription Factor AP-1AP-1BRD4Class IIa HDACsH3K27H3K4me1HDAC4OISp300SASPSenescenceSuper-enhancers

Identifiers

PMID33966634
PMCPMC8108360
OpenAlexW3162685706

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.