Evidence map›Paper›PMID 33975974›Full record

ArticlemSystems2021

Spinal Cord Injury Changes the Structure and Functional Potential of Gut Bacterial and Viral Communities.

Jingjie Du, Ahmed A Zayed, Kristina A Kigerl, Kylie Zane, Matthew B Sullivan, Phillip G Popovich

Open access · goldAbstract read
In one paragraph

Article in mSystems, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed, 1 pooled it
3.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 1 synthesis or guideline pooled it, 61 citations in OpenAlex.

  1. Pooled it
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  19. The Role of Vitamins in Spinal Cord Injury: Mechanisms and Benefits.Oxidative medicine and cellular longevity · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jingjie Du *Department of Microbiology, The Ohio State University, Columbus, Ohio, USA.
Ahmed A Zayed *Department of Microbiology, The Ohio State University, Columbus, Ohio, USA.
Kristina A Kigerl *Department of Neuroscience, The Ohio State University College of Medicine, Columbus, Ohio, USA.ORCID https://orcid.org/0000-0002-1652-0882
Kylie Zane *Medical Scientist Training Program, The Ohio State University College of Medicine, Columbus, Ohio, USA.
Matthew B SullivanDepartment of Microbiology, The Ohio State University, Columbus, Ohio, USA sullivan.948@osu.edu phillip.popovich@osumc.edu.
Phillip G PopovichDepartment of Neuroscience, The Ohio State University College of Medicine, Columbus, Ohio, USA sullivan.948@osu.edu phillip.popovich@osumc.edu.ORCID https://orcid.org/0000-0003-1329-7395
The Ohio State University · US

Funding

Overcoming Neurogenic “Meta-Inflammation” to Promote Recovery After Spinal Cord InjuryR35NS111582 · NINDS · OHIO STATE UNIVERSITY · PI PHILLIP G POPOVICH · 2019 to 2026
$8.7M
Ohio State University Neuroscience Center Core-Core EP30NS104177 · NINDS · OHIO STATE UNIVERSITY · PI BROWN, ANTHONY · 2017 to 2020
$1.9M
NINDS NIH HHS P30 NS104177NINDS NIH HHS R35 NS111582
6 · The paper itself

Abstract

Emerging data indicate that gut dysbiosis contributes to many human diseases, including several comorbidities that develop after traumatic spinal cord injury (SCI). To date, all analyses of SCI-induced gut dysbiosis have used 16S rRNA amplicon sequencing. This technique has several limitations, including being susceptible to taxonomic "blind spots," primer bias, and an inability to profile microbiota functions or identify viruses. Here, SCI-induced gut dysbiosis was assessed by applying genome- and gene-resolved metagenomic analysis of murine stool samples collected 21 days after an experimental SCI at the 4th thoracic spine (T4) or 10th thoracic spine (T10) spinal level. These distinct injuries partially (T10) or completely (T4) abolish sympathetic tone in the gut. Among bacteria, 105 medium- to high-quality metagenome-assembled genomes (MAGs) were recovered, with most (

Indexed as

gut dysbiosismetagenomicsmicrobiomespinal cord injuryvirome

Identifiers

PMID33975974
PMCPMC8125080
OpenAlexW3161501414

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.