Evidence map›Paper›PMID 34037670›Full record

ArticleThe Journal of experimental medicine2021

Bromodomain protein BRD4 directs and sustains CD8 T cell differentiation during infection.

J Justin Milner, Clara Toma, Sara Quon, Kyla Omilusik, Nicole E Scharping, Anup Dey, Miguel Reina-Campos, Hongtuyet Nguyen, Adam J Getzler, Huitian Diao and 13 more

Open access · greenAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 36 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

23 authors at 7 institutions in 1 country.

J Justin MilnerDivision of Biological Sciences, University of California San Diego, La Jolla, CA.ORCID 0000-0002-0752-2130
Clara TomaDivision of Biological Sciences, University of California San Diego, La Jolla, CA.ORCID 0000-0002-9957-4826
Sara QuonDivision of Biological Sciences, University of California San Diego, La Jolla, CA.ORCID 0000-0003-3860-3491
Kyla OmilusikDivision of Biological Sciences, University of California San Diego, La Jolla, CA.ORCID 0000-0003-3675-048X
Nicole E ScharpingDivision of Biological Sciences, University of California San Diego, La Jolla, CA.ORCID 0000-0001-9373-4617
Anup DeyDivision of Developmental Biology, National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD.ORCID 0000-0001-5866-3075
Miguel Reina-CamposDivision of Biological Sciences, University of California San Diego, La Jolla, CA.ORCID 0000-0002-0704-4271
Hongtuyet NguyenDivision of Biological Sciences, University of California San Diego, La Jolla, CA.ORCID 0000-0002-2870-8727
Adam J GetzlerDepartment of Immunology and Microbiology, The Scripps Research Institute, Jupiter, FL.ORCID 0000-0001-8091-3851
Huitian DiaoDepartment of Immunology and Microbiology, The Scripps Research Institute, Jupiter, FL.ORCID 0000-0001-9331-9683
Bingfei YuDivision of Biological Sciences, University of California San Diego, La Jolla, CA.ORCID 0000-0001-5550-6701
Arnaud DelpouxDivision of Biological Sciences, University of California San Diego, La Jolla, CA.ORCID 0000-0003-4963-9676
Tomomi M YoshidaDivision of Biological Sciences, University of California San Diego, La Jolla, CA.ORCID 0000-0003-4529-720X
Deyao LiDepartment of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA.ORCID 0000-0003-2980-3483
Jun QiDepartment of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA.ORCID 0000-0002-1461-3356
Adam VincekDepartment of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai, New York, NY.ORCID 0000-0002-7976-6927
Stephen M HedrickDivision of Biological Sciences, University of California San Diego, La Jolla, CA.ORCID 0000-0002-6345-8751
Takeshi EgawaDepartment of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO.ORCID 0000-0001-7489-1051
Ming-Ming ZhouDepartment of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai, New York, NY.ORCID 0000-0002-7049-0573
Shane CrottyDivision of Vaccine Discovery, La Jolla Institute for Allergy and Immunology, La Jolla, CA.ORCID 0000-0002-6484-6262
Keiko OzatoDivision of Developmental Biology, National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD.ORCID 0000-0001-7013-2728
Matthew E PipkinDepartment of Immunology and Microbiology, The Scripps Research Institute, Jupiter, FL.ORCID 0000-0002-9688-0190
Ananda W GoldrathDivision of Biological Sciences, University of California San Diego, La Jolla, CA.ORCID 0000-0002-5900-508X
University of California San Diego · USScripps Research Institute · USHarvard University · USIcahn School of Medicine at Mount Sinai · USNational Institutes of Health · USLa Jolla Institute for Immunology · USWashington University in St. Louis · US

Funding

Chromatin and epigenetic memory ZIAHD008815 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI OZATO, KEIKO · 2009 to 2025
$16.2M
Gene Regulation In The Immune SystemZIAHD001310 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI OZATO, KEIKO · 2009 to 2025
$15.0M
Transcription factor regulation of CD4 and CD8 T cell effector and memory differentiation and functionP01AI145815 · NIAID · UNIVERSITY OF FLORIDA · PI PIPKIN, MATTHEW EUGENE · 2020 to 2024
$11.0M
TF regulation of CD8 and CD4 T cell memory in both systemic and dermal infectionU19AI109976 · NIAID · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI CROTTY, SHANE P · 2014 to 2018
$10.5M
Single-Cell Transcriptomic and Epigenetics CoreP01AI132122 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ZUNIGA, ELINA I · 2018 to 2022
$9.8M
The transcription factor c-MYC in lymphocyte expansion and restriction of stemnessR01AI130152 · NIAID · WASHINGTON UNIVERSITY · PI Takeshi Egawa · 2017 to 2026
$4.6M
T cell maintenance: molecular mediators of T cell differentiation and survivalR37AI067545 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Ananda W Goldrath · 2022 to 2026
$3.0M
Mechanism of BET Proteins in Th17 Cell DifferentiationR01AI124465 · NIAID · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI ZHOU, MING-MING · 2016 to 2020
$2.9M
Transcriptional Mechanism of BRD4 in Solid TumorR01CA239165 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI ZHOU, MING-MING · 2019 to 2023
$2.0M
Molecular Programming of CD8+ T Cell Accumulation and Activity in TumorsR00CA234430 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MILNER, JOHN JUSTIN · 2020 to 2022
$669k
Tumor-infiltrating T cell metabolic dysfunction and genetic reprogramming for effective immunotherapyK00CA222711 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SCHARPING, NICOLE E · 2020 to 2023
$360k
Molecular programming of CD8+ T cell accumulation and activity in tumorsK99CA234430 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MILNER, JOHN JUSTIN · 2018 to 2019
$273k
NCI NIH HHS K00 CA222711NCI NIH HHS K99 CA234430NCI NIH HHS R00 CA234430NCI NIH HHS R01 CA239165NIAID NIH HHS P01 AI132122NIAID NIH HHS P01 AI145815NIAID NIH HHS R01 AI124465NIAID NIH HHS R01 AI130152NIAID NIH HHS R37 AI067545NIAID NIH HHS U19 AI109976
6 · The paper itself

Abstract

In response to infection, pathogen-specific CD8 T cells differentiate into functionally diverse effector and memory T cell populations critical for resolving disease and providing durable immunity. Through small-molecule inhibition, RNAi studies, and induced genetic deletion, we reveal an essential role for the chromatin modifier and BET family member BRD4 in supporting the differentiation and maintenance of terminally fated effector CD8 T cells during infection. BRD4 bound diverse regulatory regions critical to effector T cell differentiation and controlled transcriptional activity of terminal effector-specific super-enhancers in vivo. Consequentially, induced deletion of Brd4 or small molecule-mediated BET inhibition impaired maintenance of a terminal effector T cell phenotype. BRD4 was also required for terminal differentiation of CD8 T cells in the tumor microenvironment in murine models, which we show has implications for immunotherapies. Taken together, these data reveal an unappreciated requirement for BRD4 in coordinating activity of cis regulatory elements to control CD8 T cell fate and lineage stability.

Indexed as

AnimalsBromodomain Containing ProteinsCD8-Positive T-LymphocytesCell DifferentiationChromatinEnhancer Elements, GeneticMiceMice, KnockoutNeoplasmsNuclear ProteinsProtein BindingRNA InterferenceTranscription FactorsTranscription, GeneticVirus DiseasesBrd4 protein, mouseBromodomain Containing ProteinsChromatinNuclear ProteinsTranscription Factors

Identifiers

PMID34037670
PMCPMC8160575
OpenAlexW3165702706

What Socratic holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.