Evidence map›Paper›PMID 34053170›Full record

ArticleTraffic (Copenhagen, Denmark)2021

Proteoglycan synthesis in conserved oligomeric Golgi subunit deficient HEK293T cells is affected differently, depending on the lacking subunit.

Ravi Adusumalli, Hans-Christian Åsheim, Vladimir Lupashin, Jessica B Blackburn, Kristian Prydz

Open access · hybridAbstract read
In one paragraph

Article in Traffic (Copenhagen, Denmark), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. A Dominant Heterozygous Mutation inFrontiers in cell and developmental biology · 2021
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Ravi AdusumalliDepartment of Biosciences, University of Oslo, Oslo, Norway.
Hans-Christian ÅsheimDepartment of Oral Biology, Faculty of Dentistry, University of Oslo, Oslo, Norway.
Vladimir LupashinDepartment of Physiology and Biophysics, University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA.ORCID 0000-0002-2350-1962
Jessica B BlackburnDepartment of Physiology and Biophysics, University of Arkansas for Medical Sciences, Little Rock, Arkansas, USA.
Kristian PrydzDepartment of Biosciences, University of Oslo, Oslo, Norway.ORCID 0000-0003-3334-0936
University of Oslo · NOUniversity of Arkansas for Medical Sciences · US

Funding

Characterization of mammalian COG complex-interacting intra-Golgi trafficking macR01GM083144 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI VLADIMIR V LUPASHIN · 2008 to 2026
$6.5M
NIGMS NIH HHS R01 GM083144NIH HHS R01GM083144NIH HHS R01GM083144[Correction added on 23 June 2021, after first online publication: The first author's name has been corrected from "Ravi Adusmalli" to "Ravi Adusumalli".]
6 · The paper itself

Abstract

The Conserved Oligomeric Golgi (COG) complex is an eight subunit protein complex associated with Golgi membranes. Genetic defects affecting individual COG subunits cause congenital disorders of glycosylation (CDGs), due to mislocalization of Golgi proteins involved in glycosylation mechanisms. While the resulting defects in N-and O-glycosylation have been extensively studied, no corresponding study of proteoglycan (PG) synthesis has been undertaken. We here show that glycosaminoglycan (GAG) modification of PGs is significantly reduced, regardless which COG subunit that is missing in HEK293T cells. Least reduction was observed for cells lacking COG1 and COG8 subunits, that bridge the A and B lobes of the complex. Lack of these subunits did not reduce GAG chain lengths of secreted PGs, which was reduced in cells lacking any other subunit (COG2-7). COG3 knock out (KO) cells had particularly reduced ability to polymerize GAG chains. For cell-associated GAGs, the mutant cell lines, except COG4 and COG7 KO, displayed longer GAG chains than wild-type cells, indicating that COG subunits play a role in cellular turnover of PGs. In light of the important roles PGs play in animal development, the effects KO of individual COG subunits have on GAG synthesis could explain the variable severity of COG associated CDGs.

Indexed as

Adaptor Proteins, Vesicular TransportGolgi ApparatusAnimalsGlycosylationHEK293 CellsHumansProteoglycansAdaptor Proteins, Vesicular TransportProteoglycanscongenital disorders of glycosylationglycosaminoglycanglycosylationproteoglycansthe conserved oligomeric complexthe Golgi apparatus

Identifiers

PMID34053170
PMCPMC8382154
OpenAlexW3165227740

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.