Evidence map›Paper›PMID 34068231›Full record

ArticleInternational journal of molecular sciences2021

eIF3a Destabilization and TDP-43 Alter Dynamics of Heat-Induced Stress Granules.

Ivana Malcova, Lenka Senohrabkova, Lenka Novakova, Jiri Hasek

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Proteomic profiling of eIF3a conditional knockout mice.Frontiers in molecular biosciences · 2023
    Article
  5. Article
  6. Article
  7. Yeast Models and Molecular Mechanisms of Neurodegenerative Diseases.International journal of molecular sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ivana MalcovaInstitute of Microbiology, Czech Academy of Sciences, Videnska 1083, 14220 Prague, Czech Republic.ORCID 0000-0002-4385-3842
Lenka SenohrabkovaInstitute of Microbiology, Czech Academy of Sciences, Videnska 1083, 14220 Prague, Czech Republic.
Lenka NovakovaInstitute of Microbiology, Czech Academy of Sciences, Videnska 1083, 14220 Prague, Czech Republic.
Jiri HasekInstitute of Microbiology, Czech Academy of Sciences, Videnska 1083, 14220 Prague, Czech Republic.ORCID 0000-0001-6634-2386
Czech Academy of Sciences · CZ

Funding

Czech Science Foundation CSF16-05497SGrantová Agentura, Univerzita Karlova GACU1180213
6 · The paper itself

Abstract

Stress granules (SGs) are membrane-less assemblies arising upon various stresses in eukaryotic cells. They sequester mRNAs and proteins from stressful conditions and modulate gene expression to enable cells to resume translation and growth after stress relief. SGs containing the translation initiation factor eIF3a/Rpg1 arise in yeast cells upon robust heat shock (HS) at 46 °C only. We demonstrate that the destabilization of Rpg1 within the PCI domain in the Rpg1-3 variant leads to SGs assembly already at moderate HS at 42 °C. These are bona fide SGs arising upon translation arrest containing mRNAs, which are components of the translation machinery, and associating with P-bodies. HS SGs associate with endoplasmatic reticulum and mitochondria and their contact sites ERMES. Although Rpg1-3-labeled SGs arise at a lower temperature, their disassembly is delayed after HS at 46 °C. Remarkably, the delayed disassembly of HS SGs after the robust HS is reversed by TDP-43, which is a human protein connected with amyotrophic lateral sclerosis. TDP-43 colocalizes with HS SGs in yeast cells and facilitates cell regrowth after the stress relief. Based on our results, we propose yeast HS SGs labeled by Rpg1 and its variants as a novel model system to study functions of TDP-43 in stress granules disassembly.

Indexed as

Heat-Shock ResponseCytoplasmic GranulesDNA-Binding ProteinsEndoplasmic ReticulumEukaryotic Initiation Factor-3HumansMitochondriaProtein StabilityRNA, MessengerSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsDNA-Binding ProteinsEIF3A protein, humanEukaryotic Initiation Factor-3RNA, MessengerRPG1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTARDBP protein, humaneIF3ERERMESheat shockHsp104mitochondriaRpg1stress granulesTDP-43yeast

Identifiers

PMID34068231
PMCPMC8153170
OpenAlexW3160432331

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.