Evidence map›Paper›PMID 34076482›Full record

ArticleJournal of virology2021

Elevated HIV Infection of CD4 T Cells in MRKAd5 Vaccine Recipients Due to CD8 T Cells Targeting Adapted Epitopes.

Kai Qin, Sushma Boppana, Jonathan M Carlson, Andrew Fiore-Gartland, Jacob Files, Jie Zeng, Jeffrey Edberg, Robbie B Mailliard, Christina Ochsenbauer, Anju Bansal and 1 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
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  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Kai Qin *Department of Medicine, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Sushma Boppana *Department of Medicine, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Jonathan M CarlsonMicrosoft Research, Redmond, Washington, USA.
Andrew Fiore-GartlandVaccine and Infectious Disease Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.
Jacob FilesDepartment of Medicine, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Jie ZengDepartment of Medicine, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Jeffrey EdbergDepartment of Medicine, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Robbie B MailliardDepartment of Infectious Diseases and Microbiology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Christina OchsenbauerDepartment of Medicine, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Anju Bansal *Department of Medicine, University of Alabama at Birmingham, Birmingham, Alabama, USA.
Paul Goepfert *Department of Medicine, University of Alabama at Birmingham, Birmingham, Alabama, USA.
University of Alabama at Birmingham · USFred Hutch Cancer Center · USMicrosoft (United States) · USUniversity of Pittsburgh · US

Funding

LOC: HIV Vaccine Trials NetworkUM1AI068614 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Dan H. Barouch, Lawrence Corey · 2011 to 2026
$1175.6M
LC: HIV Vaccine Trials NetworkUM1AI068618 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Margaret Juliana McElrath · 2011 to 2026
$483.6M
SDMC: HIV Vaccine Trials NetworkUM1AI068635 · NIAID · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Peter B. Gilbert, Yunda Huang · 2011 to 2026
$385.9M
Virology CoreP30AI027767 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI Paul A. Goepfert · 1988 to 2026
$84.1M
Tennessee CFAR: Implementation of Culturally Responsive Trauma-Informed Care with Youth with HIV in Memphis, TNP30AI110527 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI John Koethe · 2015 to 2026
$27.5M
ROS Modulation of Innate and Adaptive Immunity in RAP30AR048311 · NIAMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI MOUNTZ, JOHN D · 2001 to 2017
$9.5M
A Rational Approach for HIV Vaccine T Cell Epitope SelectionR01AI112566 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI GOEPFERT, PAUL A. · 2014 to 2017
$1.9M
The impact of HIV adaptation to CD8 T cells on infection and viral controlR56AI143482 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI GOEPFERT, PAUL A. · 2020 to 2020
$662k
Impact of cross-reactive CD8 T cells on HIV-1 viral control and evolutionF30AI140829 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI BOPPANA, SUSHMA · 2018 to 2022
$169k
Impact of HLA-II Adaptation on CD4 T-cell and Tfh responses in HIV-1 VaccinationF30AI155295 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI FILES, JACOB · 2021 to 2023
$124k
HHS | National Institutes of Health (NIH) AI112566HHS | National Institutes of Health (NIH) AI140829HHS | National Institutes of Health (NIH) AI143482NIAID NIH HHS F30 AI140829NIAID NIH HHS F30 AI155295NIAID NIH HHS P30 AI027767NIAID NIH HHS P30 AI110527NIAID NIH HHS R01 AI112566NIAID NIH HHS R56 AI143482NIAID NIH HHS UM1 AI068614NIAID NIH HHS UM1 AI068618NIAID NIH HHS UM1 AI068635NIAMS NIH HHS P30 AR048311
6 · The paper itself

Abstract

HIV frequently escapes CD8 T cell responses, leading to the accumulation of viral adaptations. We recently demonstrated that during chronic HIV infection, adapted epitopes can promote maturation of dendritic cells (DCs) through direct CD8 T cell interactions and lead to enhanced HIV

Indexed as

Adaptation, PhysiologicalAdultAIDS VaccinesAllelesCD4-Positive T-LymphocytesCD8-Positive T-LymphocytesCytokinesDendritic CellsEpitopes, T-LymphocyteHistocompatibility Antigens Class IHIV-1HIV InfectionsHumansKaplan-Meier EstimateMaleViral LoadAIDS VaccinesCytokinesEpitopes, T-LymphocyteHistocompatibility Antigens Class ICD8 T cellsHIV vaccineHLA-I-associated HIV adaptationmonocyte-derived dendritic cellsMRKAd5 vaccineSTEP studyviral trans-infection

Identifiers

PMID34076482
PMCPMC8312883
OpenAlexW3165373981

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.