Evidence map›Paper›PMID 34080122›Full record

ArticleJournal of applied genetics2021

Searching for new molecular markers for cells obtained from abdominal aortic aneurysm.

Marta Lesiak, Aleksandra Augusciak-Duma, Karolina L Stepien, Agnieszka Fus-Kujawa, Malwina Botor, Aleksander L Sieron

Open access · hybridAbstract read
In one paragraph

Article in Journal of applied genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 3 pooled it
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 3 syntheses or guidelines pooled it, 9 citations in OpenAlex.

  1. Guideline
  2. Guideline
  3. Guideline
  4. Review
  5. Article
  6. Role of Extracellular Matrix and Inflammation in Abdominal Aortic Aneurysm.International journal of molecular sciences · 2022
    Review
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Marta LesiakDepartment of Molecular Biology, Faculty of Medical Sciences in Katowice, Medical University of Silesia, Medyków 18 Street, Bldg. C-1, 40-752, Katowice, Poland. mlesiak@sum.edu.pl.ORCID http://orcid.org/0000-0002-9111-2539
Aleksandra Augusciak-DumaDepartment of Molecular Biology, Faculty of Medical Sciences in Katowice, Medical University of Silesia, Medyków 18 Street, Bldg. C-1, 40-752, Katowice, Poland.
Karolina L StepienDepartment of Molecular Biology, Faculty of Medical Sciences in Katowice, Medical University of Silesia, Medyków 18 Street, Bldg. C-1, 40-752, Katowice, Poland.
Agnieszka Fus-KujawaDepartment of Molecular Biology, Faculty of Medical Sciences in Katowice, Medical University of Silesia, Medyków 18 Street, Bldg. C-1, 40-752, Katowice, Poland.
Malwina BotorDepartment of Molecular Biology, Faculty of Medical Sciences in Katowice, Medical University of Silesia, Medyków 18 Street, Bldg. C-1, 40-752, Katowice, Poland.
Aleksander L SieronDepartment of Molecular Biology, Faculty of Medical Sciences in Katowice, Medical University of Silesia, Medyków 18 Street, Bldg. C-1, 40-752, Katowice, Poland.
Medical University of Silesia · PL

Funding

Institutional grant KNW-1-055/K/8/O
6 · The paper itself

Abstract

The aim of the study was to investigate specific potential markers for cells obtained from three layers of human AAA divided into three segments along the AAA based on morphological differences. The isolated cells were compared to control commercial cell types from healthy human abdominal aortas. For each type of aortic layer, three specimens from 6 patients were compared. Total RNA was isolated from 36 cell cultures for gene expression profiling and potential new cytometry markers were typed. Isolated cells were analyzed by flow cytometry by using fluorochrome-conjugated antibodies to markers: CNN1, MYH10, ENG, ICAM2, and TEK. The relative expression of 45 genes in primary cell cultures and control lines was analyzed. Statistically significant differences were found in the expression of most of the analyzed genes between individual layers and control lines. Based on relative expression, antibodies were selected for flow cytometry. Gene expression profiles allowed to select new potential cytometry markers: CNN1, MYH10, MYOCD, ENG, ICAM2, TEK. However, none of the tested markers seems to be optimal and characteristic for a specific layer of AAA.

Indexed as

Aortic Aneurysm, AbdominalBiomarkersAorta, AbdominalGene Expression ProfilingHumansTranscriptomeBiomarkersAbdominal aortic aneurysm (AAA)Cytometry useful markersGene expressionLayers of AAA

Identifiers

PMID34080122
PMCPMC8357660
OpenAlexW3164332571

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.