Evidence map›Paper›PMID 34100009›Full record

ArticleResearch square2021

Impact of BNT162b First Vaccination on the Immune Transcriptome of Elderly Patients Infected with the B.1.351 SARS-CoV-2 Variant.

Ludwig Knabl, Hye Kyung Lee, Manuel Wieser, Anna Mur, August Zabemigg, Ludwig Knabl, Simon Rauch, Matthias Bock, Jana Schumacher, Norbert Kaiser and 2 more

Open access · greenAbstract readPreprint
In one paragraph

Article in Research square, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 8 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 3 countries.

Ludwig KnablTyrolPath, Zams, Austria.
Hye Kyung LeeNational Institute of Diabetes and Digestive and Kidney Diseases.
Manuel WieserTyrolPath, Zams, Austria.
Anna MurDivision of Internal Medicine, Krankenhaus Kufstein, Kufstein, Austria.
August ZabemiggDivision of Internal Medicine, Krankenhaus Kufstein, Kufstein, Austria.
Ludwig KnablKrankenhaus St. Vinzenz, Zams, Austria.
Simon RauchDivision of Anesthesia and Intensive Care Medicine, Krankenhaus Meran, Meran, Italy.
Matthias BockDivision of Anesthesia and Intensive Care Medicine, Krankenhaus Meran, Meran, Italy.
Jana SchumacherDivision of Internal Medicine, Krankenhaus St. Johann, St. Johann, Austria.
Norbert KaiserDivision of Internal Medicine, Krankenhaus St. Johann, St. Johann, Austria.
Priscilla FurthDepartments of Oncology & Medicine, Georgetown University, Washington, DC, USA.
Lothar HennighausenNational Institute of Diabetes and Digestive and Kidney Diseases.ORCID 0000-0001-8319-9841
Georgetown University · USNational Institute of Diabetes and Digestive and Kidney Diseases · USUniversity of Applied Sciences Kufstein · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fast-spreading variants of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) energize the COVID-19 pandemic. The B.1.351 variant carrying the escape mutation E484K in the receptor binding domain is of particular concern due to reduced immunological protection following vaccination. Protection can manifest as early as 10 days following immunization with full protection two weeks following the second dose, but the course is not well-characterized for variants. Here, we investigated the immune transcriptome of six elderly individuals (average age 82 yr.) from an old people’s home, who contracted B.1.351, with four having received the first dose of BNT162b eight to 11 days prior to the onset of COVID-19 symptoms. The patients were hospitalized and received dexamethasone treatment. Immune transcriptomes were established from PBMCs approximately 10 and 35 days after the onset of COVID-19 symptomology. RNA-seq revealed a more intensive immune response in vaccinated patients as compared to unvaccinated ones. Specifically, transcription factors linked to the JAK/STAT pathway, interferon stimulated genes, and genes associated with innate antiviral immunity and COVID-19-SARS-CoV-2 infection were highly enriched in vaccinated patients. This rendered the transcriptomes of the older vaccinated group significantly different than older unvaccinated individuals infected at the same institution and more similar to the immune response of younger unvaccinated individuals (ages 48-62) following B.1.351 infection. All individuals in this study whether vaccinated or not were hospitalized due to B.1.351 infection and one vaccinated patient died illustrating that although an enhanced immune response was documented infection it was insufficient to protect from disease. This highlights the need for maintaining physical distancing and prevention measures throughout the time course of vaccination in older adults.

Identifiers

PMID34100009
PMCPMC8183022
OpenAlexW3167079702

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.