Evidence map›Paper›PMID 34100714›Full record

ArticleeLife2021

Variations of intracellular density during the cell cycle arise from tip-growth regulation in fission yeast.

Pascal D Odermatt, Teemu P Miettinen, Joël Lemière, Joon Ho Kang, Emrah Bostan, Scott R Manalis, Kerwyn Casey Huang, Fred Chang

Open access · goldAbstract read
In one paragraph

Article in eLife, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. High Molecular Crowding in Repair Foci Surrounding DNA Breaks, Measured by Fluorescence Lifetime Imaging Microscopy.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
    Article
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  6. Article
  7. Article
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  9. Review
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  13. Article
  14. The human cell count and size distribution.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Scaling of biosynthesis and metabolism with cell size.Molecular biology of the cell · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 4 countries.

Pascal D OdermattDepartment of Cell and Tissue Biology, University of California, San Francisco, San Francisco, United States.ORCID 0000-0002-1307-1364
Teemu P MiettinenKoch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, United States.ORCID 0000-0002-5975-200X
Joël LemièreDepartment of Cell and Tissue Biology, University of California, San Francisco, San Francisco, United States.ORCID 0000-0002-9017-1959
Joon Ho KangKoch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, United States.ORCID 0000-0003-4165-7538
Emrah BostanInformatics Institute, University of Amsterdam, Amsterdamn, Netherlands.
Scott R ManalisKoch Institute for Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, United States.
Kerwyn Casey HuangDepartment of Bioengineering, Stanford University, Stanford, United States.ORCID 0000-0002-8043-8138
Fred ChangDepartment of Cell and Tissue Biology, University of California, San Francisco, San Francisco, United States.ORCID 0000-0002-8907-3286
University of California, San Francisco · USChan Zuckerberg Initiative (United States) · USKorea Institute of Brain Science · KRMassachusetts Institute of Technology · USMRC Laboratory for Molecular Cell Biology · GBUniversity of Amsterdam · NL

Funding

ASSEMBLY AND PLACEMENT OF THE CELL DIVISION RINGR01GM056836 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHANG, FRED · 1998 to 2018
$7.4M
NIGMS NIH HHS R01 GM056836Wellcome TrustWellcome Trust 110275/Z/15/Z
6 · The paper itself

Abstract

Intracellular density impacts the physical nature of the cytoplasm and can globally affect cellular processes, yet density regulation remains poorly understood. Here, using a new quantitative phase imaging method, we determined that dry-mass density in fission yeast is maintained in a narrow distribution and exhibits homeostatic behavior. However, density varied during the cell cycle, decreasing during G2, increasing in mitosis and cytokinesis, and dropping rapidly at cell birth. These density variations were explained by a constant rate of biomass synthesis, coupled to slowdown of volume growth during cell division and rapid expansion post-cytokinesis. Arrest at specific cell-cycle stages exacerbated density changes. Spatially heterogeneous patterns of density suggested links between density regulation, tip growth, and intracellular osmotic pressure. Our results demonstrate that systematic density variations during the cell cycle are predominantly due to modulation of volume expansion, and reveal functional consequences of density gradients and cell-cycle arrests.

Indexed as

Cell CycleCell SizeCytokinesisIntracellular SpaceSchizosaccharomycesTime-Lapse Imagingcell biologycell-cycle arrestcell polaritydry-mass densityfission yeastphysics of living systemspolarized tip growthquantitative phase imagingSchizosaccharomyces pombeS. pombe

Identifiers

PMID34100714
PMCPMC8221806
OpenAlexW3171006607

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.