ArticleMicrobial genomics2021
Ongoing evolution of
Open access · goldAbstract read
In one paragraph
Article in Microbial genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
16 citing papers in PubMed, 33 citations in OpenAlex.
- A new core-genome MLST approach for Chlamydia trachomatis genomic surveillance and research.Nature communications · 2026Article
- Resistome and virulome determination inMicrobiology spectrum · 2025Article
- Chlamydia trachomatis invasion: a duet of effectors.Biochemical Society transactions · 2025Review
- Evaluating methods for genome sequencing ofMicrobial genomics · 2025Article
- Article
- Anorectal lymphogranuloma venereum among men who have sex with men: a 3-year nationwide survey, France, 2020 to 2022.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2024Article
- Article
- Genomic insights into local-scale evolution of ocularMicrobial genomics · 2024Article
- Rapid expansion of lymphogranuloma venereum infections with fast diversification and spread ofMicrobiology spectrum · 2024Article
- Epidemiology and determinants of reemerging bacterial sexually transmitted infections (STIs) and emerging STIs in Europe.The Lancet regional health. Europe · 2023Review
- Genomic analysis of 61 Chlamydia psittaci strains reveals extensive divergence associated with host preference.BMC genomics · 2023Article
- Patterns of within-host spread ofbioRxiv : the preprint server for biology · 2023Article
- Patterns of within-host spread ofFrontiers in microbiology · 2023Article
- Genome organization and genomics inFrontiers in cellular and infection microbiology · 2023Review
- The Impact of Lateral Gene Transfer inFrontiers in cellular and infection microbiology · 2022Review
- Specific high-resolution scheme to improve understanding of the spatio-temporal dispersion of lymphogranuloma venereum epidemic.Frontiers in microbiology · 2022Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
22 authors at 17 institutions in 10 countries.
Helena M B Seth-SmithClinical Bacteriology & Mycology, University Hospital Basel, University of Basel, Switzerland.
Angèle BénardPresent address: Healthcare Systems Research Group, VHIR, Universitat Autònoma de Barcelona, Passeig de la Vall d'Hebron 119-129, 08035 Barcelona, Spain.
Sylvia M BruistenDepartment of Infectious Diseases, GGD Public Health Service of Amsterdam, Amsterdam, The Netherlands.
Bart VersteegDepartment of Infectious Diseases, GGD Public Health Service of Amsterdam, Amsterdam, The Netherlands.
Björn HerrmannSection of Clinical Bacteriology, Department of Medical Sciences, Uppsala University, Uppsala, Sweden.
Jen KokCentre for Infectious Diseases and Microbiology Laboratory Services, Institute of Clinical Pathology and Medical Research, Westmead Hospital, Westmead, New South Wales, Australia.
Ian CarterCentre for Infectious Diseases and Microbiology Laboratory Services, Institute of Clinical Pathology and Medical Research, Westmead Hospital, Westmead, New South Wales, Australia.
Olivia PeuchantCHU Bordeaux, Department of Bacteriology, French National Reference Center for bacterial STIs, Bordeaux, France.
Cécile BébéarCHU Bordeaux, Department of Bacteriology, French National Reference Center for bacterial STIs, Bordeaux, France.
David A LewisWestern Sydney Sexual Health Centre, Western Sydney Local Health District, Parramatta, New South Wales, Australia.
Teresa PuertaUnidad de ITS/VIH, Centro Sanitario Sandoval, Hospital Clínico San Carlos, Instituto de Investigación Sanitaria San Carlos (IdISSC), Madrid, Spain.
Darja KešeUniversity of Ljubljana, Faculty of Medicine, Institute of Microbiology and Immunology, Ljubljana, Slovenia.
Eszter BallaBacterial STI Reference Laboratory, National Public Health Center (former National Center for Epidemiology), Budapest, Hungary.
Hana ZákouckáNational Reference Laboratory for Diagnostics of Syphilis and Chlamydia Infections, National Institute of Public Health, Srobarova 48, 100 42, Prague 10, Czech Republic.
Filip RobDepartment of Dermatovenereology, Second Faculty of Medicine, Charles University and Hospital Bulovka, Budinova 2, 180 81, Prague 8, Czech Republic.
Servaas A MorréLaboratory of Immunogenetics, Department of Medical Microbiology and Infection Control, VU University Medical Center Amsterdam, Amsterdam, The Netherlands.
Bertille de BarbeyracCHU Bordeaux, Department of Bacteriology, French National Reference Center for bacterial STIs, Bordeaux, France.
Juan Carlos GalánServicio de Microbiología, Hospital Universitario Ramón y Cajal. Instituto Ramón y Cajal de Investigación Sanitaria (IRYCIS), Madrid, Spain. CIBER en Epidemiología y Salud Pública (CIBERESP).
Henry J C de VriesDepartment of Infectious Diseases, GGD Public Health Service of Amsterdam, Amsterdam, The Netherlands.
Nicholas R ThomsonWellcome Trust Sanger Institute, Cambridge, UK.
Daniel GoldenbergerClinical Bacteriology & Mycology, University Hospital Basel, University of Basel, Switzerland.
Adrian EgliClinical Bacteriology & Mycology, University Hospital Basel, University of Basel, Switzerland.
Institut Polytechnique de Bordeaux · FRGGD Amsterdam · NLThe University of Sydney · AUUniversity of Basel · CHCharles University · CZInstituto de Investigación Sanitaria del Hospital Clínico San Carlos · ESInstituto Ramón y Cajal de Investigación Sanitaria · ESLondon School of Hygiene & Tropical Medicine · GBMaastricht University · NLNational Center for Epidemiology · HUNational Institute of Public Health · CZSIB Swiss Institute of Bioinformatics · CHUniversitat Autònoma de Barcelona · ESUniversity of Ljubljana · SIUppsala University · SEWellcome Sanger Institute · GBWestmead Hospital · AU
Funding
No grant is acknowledged in the PubMed record.
Abstract
Lymphogranuloma venereum (LGV), the invasive infection of the sexually transmissible infection (STI)
Indexed as
Evolution, MolecularGenomicsMolecular EpidemiologyAdultAgedAustraliaBacterial Outer Membrane ProteinsBase SequenceChlamydia trachomatisEuropeGenotypeHomosexuality, MaleHumansLymphogranuloma VenereumMaleMiddle AgedBacterial Outer Membrane ProteinsOMPA outer membrane proteinsevolutionhomosexualityLGVmolecular epidemiologyouter membrane proteinselective pressuresexually transmitted infectionssurveillancewhole genome sequencing
Identifiers
What Socratic holds
Textmetadata
LicenceCC BY-NC
Read underepoch 390
Registered trials
None linked
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.