Evidence map›Paper›PMID 34241817›Full record

ArticleJournal of applied genetics2021

Genome-wide identification and expression analysis of glycosyltransferase gene family 1 in Quercus robur L.

Jie Zhang, Li-Mei Lin, Wen-Wen Cheng, Xin Song, Yue-Hong Long, Zhao-Bin Xing

Abstract read
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In one paragraph

Article in Journal of applied genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
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  5. Identification ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jie ZhangCollege of Life Science, North China University of Science and Technology, Tangshan, Hebei, China.
Li-Mei LinCollege of Life Science, North China University of Science and Technology, Tangshan, Hebei, China.
Wen-Wen ChengCollege of Life Science, North China University of Science and Technology, Tangshan, Hebei, China.
Xin SongCollege of Life Science, North China University of Science and Technology, Tangshan, Hebei, China.
Yue-Hong LongCollege of Life Science, North China University of Science and Technology, Tangshan, Hebei, China.
Zhao-Bin XingCollege of Life Science, North China University of Science and Technology, Tangshan, Hebei, China. xingzb@ncst.edu.cn.
North China University of Science and Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glycosyltransferase gene family 1, also known as uridine diphosphate glycosyltransferase (UGT), is the largest glycosyltransferase family in plants, playing a vital role in their growth and development. In this study, 244 UGT genes with conserved PSPG motifs were identified in the genome of Quercus robur L. The collinearity analysis results showed that tandem repeat was the main way of UGT genes expansion in Q. robur, with 21 groups of 55 tandem repeat genes. UGT genes were divided into 15 subgroups A-P; group K was lost, and the gene structure and conserved domain of the same subgroup were basically the same. Cis-element analysis showed that upstream 2,000 bp promoter sequence of UGT genes contained light response elements, plant hormone response elements, and stress-related cis-elements, which indicated that UGT genes of Q. robur might be regulated by various metabolic pathways. In particular, some UGTs in group L of Q. robur contained a conserved promoter structure. The expression pattern analysis results demonstrated that UGT genes of groups B, D, E, and I were differentially expressed under Tortrix viridana L. stress. The expression of UGTs in group E decreased under stress, the expression of group L increased, and that of genes in groups D and B were different. The functions of UGT genes in E and L groups are relatively conservative, and their functions may also conserve among species. The study results have a particular reference value for further research on the function of Q. robur UGT genes.

Indexed as

GlycosyltransferasesQuercusGenomePhylogenyGlycosyltransferasesGene familyGlycosyltransferasePhylogenetic treeQuercus robur L.UGT

Identifiers

PMID34241817
OpenAlexW3157437614

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.