Evidence map›Paper›PMID 34340992›Full record

ArticleGenome research2021

Small RNA expression and miRNA modification dynamics in human oocytes and early embryos.

Pauliina Paloviita, Christel Hydén-Granskog, Dawit A Yohannes, Priit Paluoja, Juha Kere, Juha S Tapanainen, Kaarel Krjutškov, Timo Tuuri, Urmo Võsa, Sanna Vuoristo

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. The multi-omics regulatory landscape of human early embryogenesis.Cellular and molecular life sciences : CMLS · 2026
    Review
  3. Article
  4. Review
  5. MiRNA-based drugs: challenges and delivery strategies.Applied microbiology and biotechnology · 2025
    Review
  6. Article
  7. The RNA mThe EMBO journal · 2025
    Article
  8. Article
  9. The Mammalian Oocyte: A Central Hub for Cellular Reprogramming and Stemness.Stem cells and cloning : advances and applications · 2025
    Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Pauliina PaloviitaUniversity of Helsinki, Department of Obstetrics and Gynecology, 00014, Helsinki, Finland.ORCID 0000-0002-9212-8698
Christel Hydén-GranskogHelsinki University Hospital, Department of Obstetrics and Gynecology, 00029, Helsinki, Finland.
Dawit A YohannesUniversity of Helsinki, Department of Obstetrics and Gynecology, 00014, Helsinki, Finland.
Priit PaluojaCompetence Centre for Health Technologies, 50411, Tartu, Estonia.
Juha KereKarolinska Institutet, Department of Biosciences and Nutrition, 14152, Huddinge, Sweden.
Juha S TapanainenUniversity of Helsinki, Department of Obstetrics and Gynecology, 00014, Helsinki, Finland.
Kaarel KrjutškovCompetence Centre for Health Technologies, 50411, Tartu, Estonia.
Timo TuuriUniversity of Helsinki, Department of Obstetrics and Gynecology, 00014, Helsinki, Finland.
Urmo VõsaEstonian Genome Center, Institute of Genomics, University of Tartu, 51010, Tartu, Estonia.
Sanna VuoristoUniversity of Helsinki, Department of Obstetrics and Gynecology, 00014, Helsinki, Finland.
University of Helsinki · FICompetence Centre on Health Technologies (Estonia) · EEEstonian Biocentre · EE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Small noncoding RNAs (sRNAs) play important roles during the oocyte-to-embryo transition (OET), when the maternal phenotype is reprogrammed and the embryo genome is gradually activated. The transcriptional program driving early human development has been studied with the focus mainly on protein-coding RNAs, and expression dynamics of sRNAs remain largely unexplored. We profiled sRNAs in human oocytes and early embryos using an RNA-sequencing (RNA-seq) method suitable for low inputs of material. We show that OET in humans is temporally coupled with the transition from predominant expression of oocyte short piRNAs (os-piRNAs) in oocytes, to activation of microRNA (miRNA) expression in cleavage stage embryos. Additionally, 3' mono- and oligoadenylation of miRNAs is markedly increased in zygotes. We hypothesize that this may modulate the function or stability of maternal miRNAs, some of which are retained throughout the first cell divisions in embryos. This study is the first of its kind elucidating the dynamics of sRNA expression and miRNA modification along a continuous trajectory of early human development and provides a valuable data set for in-depth interpretative analyses.

Indexed as

MicroRNAsEmbryo, MammalianHumansOocytesSequence Analysis, RNAZygoteMicroRNAs

Identifiers

PMID34340992
PMCPMC8327922
OpenAlexW3192681008

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.