Evidence map›Paper›PMID 34356506›Full record

ReviewBiology2021

The Epistemic Revolution Induced by Microbiome Studies: An Interdisciplinary View.

Eric Bapteste, Philippe Gérard, Catherine Larose, Manuel Blouin, Fabrice Not, Liliane Campos, Géraldine Aïdan, M André Selosse, M Sarah Adénis, Frédéric Bouchard and 6 more

Abstract readReview
In one paragraph

Review in Biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Diet-gut microbiota interactions on cardiovascular disease.Computational and structural biotechnology journal · 2022
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Eric BaptesteInstitut de Systématique, Evolution, Biodiversité (ISYEB), Sorbonne Université, CNRS, Museum National d'Histoire Naturelle, EPHE, Université des Antilles, 75005 Paris, France.
Philippe GérardMicalis Institute, INRAE, AgroParisTech, Université Paris-Saclay, 78350 Jouy-en-Josas, France.ORCID 0000-0001-9521-0067
Catherine LaroseEnvironmental Microbial Genomics, Laboratoire Ampère, École Centrale de Lyon, CNRS, University of Lyon, 69134 Ecully, France.
Manuel BlouinDépartement Agronomie Agroéquipements Elevage Environnement, UMR 1347 Agroécologie (INRA/AgroSup/Université de Bourgogne), 26 Bd Docteur Petitjean, BP 87999, CEDEX, 21079 Dijon, France.ORCID 0000-0002-3928-9070
Fabrice NotSorbonne Université, CNRS, AD2M-UMR7144, Station Biologique de Roscoff, 29680 Roscoff, France.ORCID 0000-0002-9342-195X
Liliane CamposPRISMES-Langues, Textes, Arts et Cultures du Monde Anglophone-EA 4398, Université Sorbonne Nouvelle and Institut Universitaire de France, 75005 Paris, France.ORCID 0000-0003-0839-3120
Géraldine AïdanCERSA, UMR 7106 (CNRS-Université Paris II Panthéon-Assas), 10 rue Thénard, 75005 Paris, France.
M André SelosseInstitut de Systématique, Evolution, Biodiversité (ISYEB), Sorbonne Université, CNRS, Museum National d'Histoire Naturelle, EPHE, Université des Antilles, 75005 Paris, France.ORCID 0000-0003-3471-9067
M Sarah AdénisPILI, 16 Avenue du Bas Meudon, 92130 Issy-les-Moulineaux, France.
Frédéric BouchardDépartement de Philosophie, Université de Montréal, Montréal, QC H3C 3J7, Canada.
Sébastien DutreuilCentre Gilles Gaston Granger, CNRS, UMR7304 Université d'Aix-Marseille-Site Schuman, Maison de la Recherche, 29, Avenue Robert Schuman, 13621 Aix-en-Provence, France.
Eduardo CorelInstitut de Systématique, Evolution, Biodiversité (ISYEB), Sorbonne Université, CNRS, Museum National d'Histoire Naturelle, EPHE, Université des Antilles, 75005 Paris, France.
Chloé VigliottiUMR MIA-PARIS, 16 Rue Claude Bernard, 75005 Paris, France.
Philippe HunemanInstitut d'Histoire et de Philosophie des Sciences et des Techniques, CNRS/Université Paris I Sorbonne, 13 rue du Four, 75006 Paris, France.
F Joseph LapointeDépartement de Sciences Biologiques, Complexe des Sciences, Université de Montréal, 1375 Avenue Thérèse-Lavoie-Roux, Montréal, QC H2V 0B3, Canada.ORCID 0000-0002-0327-9073
Philippe LopezInstitut de Systématique, Evolution, Biodiversité (ISYEB), Sorbonne Université, CNRS, Museum National d'Histoire Naturelle, EPHE, Université des Antilles, 75005 Paris, France.ORCID 0000-0003-3410-9744

Funding

Centre National de la Recherche Scientifique REVMICNAT
6 · The paper itself

Abstract

Many separate fields and practices nowadays consider microbes as part of their legitimate focus. Therefore, microbiome studies may act as unexpected unifying forces across very different disciplines. Here, we summarize how microbiomes appear as novel major biological players, offer new artistic frontiers, new uses from medicine to laws, and inspire novel ontologies. We identify several convergent emerging themes across ecosystem studies, microbial and evolutionary ecology, arts, medicine, forensic analyses, law and philosophy of science, as well as some outstanding issues raised by microbiome studies across these disciplines and practices. An 'epistemic revolution induced by microbiome studies' seems to be ongoing, characterized by four features: (i) an ecologization of pre-existing concepts within disciplines, (ii) a growing interest in systemic analyses of the investigated or represented phenomena and a greater focus on interactions as their root causes, (iii) the intent to use openly multi-scalar interaction networks as an explanatory framework to investigate phenomena to acknowledge the causal effects of microbiomes, (iv) a reconceptualization of the usual definitions of which individuals are worth considering as an explanans or as an explanandum by a given field, which result in a fifth strong trend, namely (v) a de-anthropocentrification of our perception of the world.

Indexed as

evolutionary microbiologyhumanitiesindividualslawliteraturemicrobial ecologymicrobiomesnetworksphilosophy of biologyselectionvisual art

Identifiers

PMID34356506
PMCPMC8301382

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.