Evidence map›Paper›PMID 34359637›Full record

ArticleCancers2021

Identification of an RNA-Binding-Protein-Based Prognostic Model for Ewing Sarcoma.

Yi Chen, Huafang Su, Yanhong Su, Yifan Zhang, Yingbo Lin, Felix Haglund

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.5field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. RNA-binding proteins in bone pathophysiology.Frontiers in cell and developmental biology · 2024
    Review
  6. Prognostic value ofHeliyon · 2023
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Yi ChenDepartment of Oncology-Pathology, Karolinska Institutet, Solna, 17176 Stockholm, Sweden.ORCID 0000-0002-4891-8289
Huafang SuDepartment of Radiation and Medical Oncology, The First Affiliated Hospital of Wenzhou Medical University, Wenzhou 325000, China.
Yanhong SuDepartment of Oncology-Pathology, Karolinska Institutet, Solna, 17176 Stockholm, Sweden.
Yifan ZhangDepartment of Oncology-Pathology, Karolinska Institutet, Solna, 17176 Stockholm, Sweden.
Yingbo LinDepartment of Oncology-Pathology, Karolinska Institutet, Solna, 17176 Stockholm, Sweden.
Felix HaglundDepartment of Oncology-Pathology, Karolinska Institutet, Solna, 17176 Stockholm, Sweden.
Karolinska University Hospital · SEKarolinska Institutet · SEWenzhou Medical University · CN

Funding

Cancerfonden JCIA-190003Cancerfonden PJ-190299Cancerföreningen i Stockholm 284053
6 · The paper itself

Abstract

RNA-binding proteins (RBPs) are important transcriptomic regulators and may be important in tumorigenesis. Here, we sought to investigate the clinical impact of RBPs for patients with Ewing sarcoma (ES). ES transcriptome signatures were characterized from four previously published cohorts and grouped into new training and validation cohorts. A total of three distinct subtypes were identified and compared for differences in patient prognosis and RBP signatures. Next, univariate Cox and Lasso regression models were used to identify hub prognosis-related RBPs and construct a prognostic risk model, and prediction capacity was assessed through time-dependent receiver operating characteristics (ROCs), Kaplan-Meier curves, and nomograms. Across the three RBP subtypes, 29 significant prognostic-associated RBP genes were identified, of which 10 were used to build and validate an RBP-associated prognostic risk model (RPRM) that had a stable predictive value and could be considered valuable for clinical risk-stratification of ES. A comparison with immunohistochemistry validation showed a significant association between overall survival and NSUN7 immunoreactivity, which was an independent favorable prognostic marker. The association of RBP signatures with ES clinical prognosis provides a strong rationale for further investigation into RBPs molecular mechanisms.

Indexed as

Ewing sarcomaprognosis predictionregulation networkrisk modelRNA-binding proteins

Identifiers

PMID34359637
PMCPMC8345188
OpenAlexW3185575021

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.