Evidence map›Paper›PMID 34402193›Full record

ArticleCancer medicine2021

Key sunitinib-related biomarkers for renal cell carcinoma.

Yun Peng, Shiqiang Dong, Yuxuan Song, Dingkun Hou, Lili Wang, Bowen Li, Haitao Wang

Open access · goldAbstract read
In one paragraph

Article in Cancer medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it, 39 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Yun PengTianjin Institute of Urology, The 2nd Hospital of Tianjin Medical University, Tianjin, China.
Shiqiang DongTianjin Institute of Urology, The 2nd Hospital of Tianjin Medical University, Tianjin, China.
Yuxuan SongDepartment of Urology, Tianjin Medical University General Hospital, Tianjin, China.
Dingkun HouTianjin Institute of Urology, The 2nd Hospital of Tianjin Medical University, Tianjin, China.
Lili WangDepartment of Oncology, The 2nd Hospital of Tianjin Medical University, Tianjin, China.
Bowen LiTianjin Institute of Urology, The 2nd Hospital of Tianjin Medical University, Tianjin, China.
Haitao WangDepartment of Oncology, The 2nd Hospital of Tianjin Medical University, Tianjin, China.ORCID 0000-0003-4345-9375
Second Hospital of Tianjin Medical University · CNTianjin Medical University · CNTianjin Medical University General Hospital · CN

Funding

Clinical Research of Tianjin Medical University 2018kylc004National Natural Science Foundation of China 81572543Science and Technology Support Program of Tianjin 17ZXMFSY00040
6 · The paper itself

Abstract

backgroundRenal cell carcinoma (RCC) contributed to 403,262 new cases worldwide in 2018, which constitutes 2.2% of global cancer, nevertheless, sunitinib, one of the major targeted therapeutic agent for RCC, often developed invalid due to resistance. Emerging evidences suggested sunitinib can impact tumor environment which has been proven to be a vital factor for tumor progression.

methodsIn the present study, we used ssGSEA to extract the immune infiltrating abundance of clear cell RCC (ccRCC) and normal control samples from GSE65615, TCGA, and GTEx; key immune cells were determined by Student's t-test and univariable Cox analysis. Co-expression network combined with differentially expressed analysis was then applied to derive key immune-related genes for ccRCC, followed by the identification of hub genes using differential expression analysis. Subsequently, explorations and validations of the biological function and the immune-related and sunitinib-related characteristics were conducted in KEGG, TISIDB, Oncomine, ICGC, and GEO databases.

resultsWe refined immature dendritic cells and central memory CD4 T cells which showed associations with sunitinib and ccRCC. Following, five hub genes (CRYBB1, RIMBP3C, CEACAM4, HAMP, and LYL1) were identified for their strong relationships with sunitinib and immune infiltration in ccRCC. Further validations in external data refined CRYBB1, CEACAM4, and HAMP which play a vital role in sunitinib resistance, immune infiltrations in ccRCC, and the development and progression of ccRCC. In conclusion, our findings could shed light on the resistance of sunitinib in ccRCC and provide novel biomarkers or drug targets for ccRCC.

Indexed as

Antineoplastic AgentsBiomarkers, TumorCarcinoma, Renal CellHumansKidney NeoplasmsPrognosisSunitinibAntineoplastic AgentsBiomarkers, TumorSunitinibCEACAM4CRYBB1HAMPrenal cell carcinomasunitinib

Identifiers

PMID34402193
PMCPMC8495283
OpenAlexW3195013666

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.