Evidence map›Paper›PMID 34413513›Full record

ArticleNature neuroscience2021

A human forebrain organoid model of fragile X syndrome exhibits altered neurogenesis and highlights new treatment strategies.

Yunhee Kang, Ying Zhou, Yujing Li, Yanfei Han, Jie Xu, Weibo Niu, Ziyi Li, Shiying Liu, Hao Feng, Wen Huang and 12 more

Open access · greenAbstract read
In one paragraph

Article in Nature neuroscience, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 114 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
114citing papers in PubMed, 1 pooled it
21.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

114 citing papers in PubMed, 1 synthesis or guideline pooled it, 163 citations in OpenAlex.

  1. Variable expression ofProceedings of the National Academy of Sciences of the United States of America · 2024
    Pooled it
  2. Effects of AFQ056 on language learning in fragile X syndrome.The Journal of clinical investigation · 2023
    Trial
  3. Article
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  5. Article
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  7. MECP2Science China. Life sciences · 2026
    Article
  8. The mMolecular psychiatry · 2026
    Article
  9. Review
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  17. Up-regulation of Minibrain/DYRK1A contributes to macrocephaly and brain overgrowth in aProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  18. Review
  19. Article
  20. Article

54 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 5 institutions in 2 countries.

Yunhee Kang *Department of Human Genetics, Emory University School of Medicine, Atlanta, GA, USA.ORCID http://orcid.org/0000-0001-5622-4570
Ying Zhou *Department of Psychiatry and Behavioral Scieces, Emory University School of Medicine, Atlanta, GA, USA.
Yujing Li *Department of Human Genetics, Emory University School of Medicine, Atlanta, GA, USA.
Yanfei HanDepartment of Psychiatry and Behavioral Scieces, Emory University School of Medicine, Atlanta, GA, USA.
Jie XuThe Graduate Program in Genetics and Molecular Biology, Emory University, Atlanta, GA, USA.
Weibo NiuDepartment of Psychiatry and Behavioral Scieces, Emory University School of Medicine, Atlanta, GA, USA.
Ziyi LiDepartment of Biostatistics, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.ORCID http://orcid.org/0000-0001-8359-0533
Shiying LiuDepartment of Population and Quantitative Health Sciences, Case Western Reserve University, Cleveland, OH, USA.
Hao FengDepartment of Population and Quantitative Health Sciences, Case Western Reserve University, Cleveland, OH, USA.
Wen HuangCenter for Medical Genetics, School of Life Sciences, Central South University, Changsha, Hunan, China.
Ranhui DuanCenter for Medical Genetics, School of Life Sciences, Central South University, Changsha, Hunan, China.
Tianmin XuDepartment of Gynecology and Obstetrics, The Second Hospital of Jilin University, Changchun, Jilin, China.ORCID http://orcid.org/0000-0002-1219-061X
Nisha RajDepartment of Cell Biology, Emory University School of Medicine, Atlanta, GA, USA.ORCID http://orcid.org/0000-0002-5980-5001
Feiran ZhangDepartment of Human Genetics, Emory University School of Medicine, Atlanta, GA, USA.ORCID http://orcid.org/0000-0001-6222-6177
Juan DouDepartment of Psychiatry and Behavioral Scieces, Emory University School of Medicine, Atlanta, GA, USA.
Chongchong XuDepartment of Psychiatry and Behavioral Scieces, Emory University School of Medicine, Atlanta, GA, USA.
Hao WuDepartment of Biostatistics and Bioinformatics, Emory University School of Public Health, Atlanta, GA, USA.
Gary J BassellDepartment of Cell Biology, Emory University School of Medicine, Atlanta, GA, USA.ORCID http://orcid.org/0000-0003-2622-0127
Stephen T WarrenDepartment of Human Genetics, Emory University School of Medicine, Atlanta, GA, USA.
Emily G AllenDepartment of Human Genetics, Emory University School of Medicine, Atlanta, GA, USA.
Peng JinDepartment of Human Genetics, Emory University School of Medicine, Atlanta, GA, USA. peng.jin@emory.edu.ORCID http://orcid.org/0000-0001-6137-6659
Zhexing WenDepartment of Psychiatry and Behavioral Scieces, Emory University School of Medicine, Atlanta, GA, USA. zhexing.wen@emory.edu.ORCID http://orcid.org/0000-0002-1518-3845
Emory University · USCase Western Reserve University · USCentral South University · CNSecond Affiliated Hospital of Jilin University · CNThe University of Texas MD Anderson Cancer Center · US

Funding

Implementing a Maternal health and PRegnancy Outcomes Vision for Everyone (IMPROVE)UL1TR002378 · NCATS · EMORY UNIVERSITY · PI Andres J Garcia, Elizabeth O. Ofili · 2017 to 2026
$92.1M
Strategies to rescue PI3K dysregulation in Fragile X SyndromeU54HD082013 · NICHD · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI RICHTER, JOEL D · 2014 to 2019
$10.2M
Molecular Basis of rCGG-Mediated NeurodegenerationR01NS051630 · NINDS · EMORY UNIVERSITY · PI NELSON, DAVID LOREN · 2006 to 2023
$9.8M
Recruitment CoreU54NS091859 · NINDS · EMORY UNIVERSITY · PI WARREN, STEPHEN T. · 2014 to 2019
$9.1M
Project 3P50HD104458 · NICHD · EMORY UNIVERSITY · PI CHEN, LU · 2020 to 2024
$8.1M
Modeling Zika virus pathogenesis and potential intervention during neural development using a human brain organoid systemU19AI131130 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI MING, GUO-LI · 2017 to 2021
$7.7M
Dynamic DNA Modifications in Brain and DiseasesR35NS111602 · NINDS · EMORY UNIVERSITY · PI PENG JIN · 2019 to 2026
$6.5M
Dynamic RNA Modifications in human brain development and autismU01MH116441 · NIMH · EMORY UNIVERSITY · PI JIN, PENG · 2018 to 2022
$4.9M
Translational assessment of brain bioenergetic function in schizophreniaR01MH121102 · NIMH · UNIVERSITY OF MARYLAND BALTIMORE · PI MARANO, CHRISTOPHER, MCCULLUMSMITH, ROBERT E · 2020 to 2024
$3.7M
Towards a Better Understanding of Fragile X Syndrome Using Human Brain OrganoidsR21MH123711 · NIMH · EMORY UNIVERSITY · PI WEN, ZHEXING · 2020 to 2020
$429k
In-line, Non-invasive, Real-time 3D Quantitative Phase Microscopy for OrganoidsR21NS117067 · NINDS · GEORGIA INSTITUTE OF TECHNOLOGY · PI LU, HANG, ROBLES, FRANCISCO E · 2020 to 2020
$426k
NCATS NIH HHS UL1 TR002378NIAID NIH HHS U19 AI131130NICHD NIH HHS P50 HD104458NICHD NIH HHS U54 HD082013NIMH NIH HHS R01 MH121102NIMH NIH HHS R21 MH123711NIMH NIH HHS U01 MH116441NINDS NIH HHS R01 NS051630NINDS NIH HHS R21 NS117067NINDS NIH HHS R35 NS111602NINDS NIH HHS U54 NS091859
6 · The paper itself

Abstract

Fragile X syndrome (FXS) is caused by the loss of fragile X mental retardation protein (FMRP), an RNA-binding protein that can regulate the translation of specific mRNAs. In this study, we developed an FXS human forebrain organoid model and observed that the loss of FMRP led to dysregulated neurogenesis, neuronal maturation and neuronal excitability. Bulk and single-cell gene expression analyses of FXS forebrain organoids revealed that the loss of FMRP altered gene expression in a cell-type-specific manner. The developmental deficits in FXS forebrain organoids could be rescued by inhibiting the phosphoinositide 3-kinase pathway but not the metabotropic glutamate pathway disrupted in the FXS mouse model. We identified a large number of human-specific mRNAs bound by FMRP. One of these human-specific FMRP targets, CHD2, contributed to the altered gene expression in FXS organoids. Collectively, our study revealed molecular, cellular and electrophysiological abnormalities associated with the loss of FMRP during human brain development.

Indexed as

AdultBrainCell DifferentiationDNA-Binding ProteinsElectrophysiological PhenomenaFragile X SyndromeHumansMaleModels, NeurologicalNeurogenesisNeuronsPhosphatidylinositol 3-KinasesProsencephalonProtein BindingProtein Kinase InhibitorsReceptors, Metabotropic GlutamateCHD2 protein, humanDNA-Binding ProteinsPhosphatidylinositol 3-KinasesProtein Kinase InhibitorsReceptors, Metabotropic GlutamateRNA, Messenger

Identifiers

PMID34413513
PMCPMC8484073
OpenAlexW3196215773

What Socratic holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.