Evidence map›Paper›PMID 34417521›Full record

ArticleScientific reports2021

Su(Hw) primes 66D and 7F Drosophila chorion genes loci for amplification through chromatin decondensation.

Nadezhda E Vorobyeva, Maksim Erokhin, Darya Chetverina, Alexey N Krasnov, Marina Yu Mazina

Abstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Finishing the egg.Genetics · 2024
    Article
  5. Coregulators Reside withinInternational journal of molecular sciences · 2023
    Article
  6. Polycomb Recruiters Inside and Outside of the Repressed Domains.International journal of molecular sciences · 2023
    Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Nadezhda E VorobyevaInstitute of Gene Biology, Russian Academy of Sciences, Moscow, Russia, 119334.
Maksim ErokhinInstitute of Gene Biology, Russian Academy of Sciences, Moscow, Russia, 119334.
Darya ChetverinaInstitute of Gene Biology, Russian Academy of Sciences, Moscow, Russia, 119334.
Alexey N KrasnovInstitute of Gene Biology, Russian Academy of Sciences, Moscow, Russia, 119334. krasnov@genebiology.ru.
Marina Yu MazinaInstitute of Gene Biology, Russian Academy of Sciences, Moscow, Russia, 119334. mazinam@genebiology.ru.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Suppressor of Hairy wing [Su(Hw)] is an insulator protein that participates in regulating chromatin architecture and gene repression in Drosophila. In previous studies we have shown that Su(Hw) is also required for pre-replication complex (pre-RC) recruitment on Su(Hw)-bound sites (SBSs) in Drosophila S2 cells and pupa. Here, we describe the effect of Su(Hw) on developmentally regulated amplification of 66D and 7F Drosophila amplicons in follicle cells (DAFCs), widely used as models in replication studies. We show Su(Hw) binding co-localizes with all known DAFCs in Drosophila ovaries, whereas disruption of Su(Hw) binding to 66D and 7F DAFCs causes a two-fold decrease in the amplification of these loci. The complete loss of Su(Hw) binding to chromatin impairs pre-RC recruitment to all amplification regulatory regions of 66D and 7F loci at early oogenesis (prior to DAFCs amplification). These changes coincide with a considerable Su(Hw)-dependent condensation of chromatin at 66D and 7F loci. Although we observed the Brm, ISWI, Mi-2, and CHD1 chromatin remodelers at SBSs genome wide, their remodeler activity does not appear to be responsible for chromatin decondensation at the 66D and 7F amplification regulatory regions. We have discovered that, in addition to the CBP/Nejire and Chameau histone acetyltransferases, the Gcn5 acetyltransferase binds to 66D and 7F DAFCs at SBSs and this binding is dependent on Su(Hw). We propose that the main function of Su(Hw) in developmental amplification of 66D and 7F DAFCs is to establish a chromatin structure that is permissive to pre-RC recruitment.

Indexed as

Gene AmplificationGenetic LociAnimalsChorionChromatinChromatin Assembly and DisassemblyCluster AnalysisDNA ReplicationDrosophila melanogasterDrosophila ProteinsFemaleModels, BiologicalMutationNucleosomesOogenesisOvarian FollicleChromatinDrosophila ProteinsNucleosomesRepressor Proteinssu(Hw) protein, Drosophila

Identifiers

PMID34417521
PMCPMC8379230

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.