Evidence map›Paper›PMID 34446715›Full record

ArticleNature communications2021

A guanidine-degrading enzyme controls genomic stability of ethylene-producing cyanobacteria.

Bo Wang, Yao Xu, Xin Wang, Joshua S Yuan, Carl H Johnson, Jamey D Young, Jianping Yu

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 46 citations in OpenAlex.

  1. Review
  2. Deciphering guanidine assimilation and riboswitch-based gene regulation in cyanobacteria for synthetic biology applications.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Article
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  5. Article
  6. Review
  7. Article
  8. Biosynthesis of guanidine-containing natural products in cyanobacteria.Journal of industrial microbiology & biotechnology · 2024
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. The Freshwater CyanobacteriumPlants (Basel, Switzerland) · 2024
    Article
  14. Article
  15. Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Bo WangBiosciences Center, National Renewable Energy Laboratory, Golden, CO, USA. bo.wang.vu@gmail.com.ORCID 0000-0002-6047-1221
Yao XuDepartment of Biological Sciences, Vanderbilt University, Nashville, TN, USA.
Xin WangSynthetic and Systems Biology Innovation Hub, Department of Plant Pathology and Microbiology, Texas A&M University, College Station, TX, USA.ORCID 0000-0002-7174-3042
Joshua S YuanSynthetic and Systems Biology Innovation Hub, Department of Plant Pathology and Microbiology, Texas A&M University, College Station, TX, USA.ORCID 0000-0002-0129-3904
Carl H JohnsonDepartment of Biological Sciences, Vanderbilt University, Nashville, TN, USA.
Jamey D YoungDepartment of Chemical and Biomolecular Engineering, Vanderbilt University, Nashville, TN, USA.ORCID 0000-0002-0871-1494
Jianping YuBiosciences Center, National Renewable Energy Laboratory, Golden, CO, USA. Jianping.Yu@nrel.gov.ORCID 0000-0003-0466-3197
Vanderbilt University · USNational Laboratory of the Rockies · USMiami University · USTexas A&M University · US

Funding

Circadian Programs in BacteriaR37GM067152 · NIGMS · VANDERBILT UNIVERSITY · PI JOHNSON, CARL HIRSCHIE · 2015 to 2024
$4.1M
Regulation and Significance of Sustained Circadian OscillationsR01GM107434 · NIGMS · VANDERBILT UNIVERSITY · PI JOHNSON, CARL HIRSCHIE · 2013 to 2024
$4.0M
Circadian Programs in BacteriaR01GM067152 · NIGMS · VANDERBILT UNIVERSITY · PI JOHNSON, CARL HIRSCHIE · 2003 to 2014
$3.9M
BRET Interaction System for Circadian Clock ProteinsR01GM065467 · NIGMS · VANDERBILT UNIVERSITY · PI JOHNSON, CARL HIRSCHIE · 2002 to 2005
$825k
NIGMS NIH HHS R01 GM065467NIGMS NIH HHS R01 GM067152NIGMS NIH HHS R01 GM107434NIGMS NIH HHS R37 GM067152
6 · The paper itself

Abstract

Recent studies have revealed the prevalence and biological significance of guanidine metabolism in nature. However, the metabolic pathways used by microbes to degrade guanidine or mitigate its toxicity have not been widely studied. Here, via comparative proteomics and subsequent experimental validation, we demonstrate that Sll1077, previously annotated as an agmatinase enzyme in the model cyanobacterium Synechocystis sp. PCC 6803, is more likely a guanidinase as it can break down guanidine rather than agmatine into urea and ammonium. The model cyanobacterium Synechococcus elongatus PCC 7942 strain engineered to express the bacterial ethylene-forming enzyme (EFE) exhibits unstable ethylene production due to toxicity and genomic instability induced by accumulation of the EFE-byproduct guanidine. Co-expression of EFE and Sll1077 significantly enhances genomic stability and enables the resulting strain to achieve sustained high-level ethylene production. These findings expand our knowledge of natural guanidine degradation pathways and demonstrate their biotechnological application to support ethylene bioproduction.

Indexed as

Genomic InstabilityBacterial ProteinsEthylenesGene Expression Regulation, BacterialGenome, BacterialGuanidineSynechococcusSynechocystisBacterial ProteinsethyleneEthylenesGuanidine

Identifiers

PMID34446715
PMCPMC8390497
OpenAlexW3195519604

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.