Evidence map›Paper›PMID 34514887›Full record

ReviewInternational journal of toxicology2021

Metabolomics as a Truly Translational Tool for Precision Medicine.

Julian C Schmidt, Bonnie V Dougherty, Richard D Beger, Dean P Jones, Michael A Schmidt, William B Mattes

Open access · hybridAbstract readReview
In one paragraph

Review in International journal of toxicology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Julian C Schmidt466810Sovaris Aerospace, Boulder, CO, USA.
Bonnie V DoughertyDepartment of Biomedical Engineering, 2358University of Virginia, Charlottesville, VA, USA.
Richard D BegerDivision of Systems Biology, 4136National Center for Toxicological Research, US Food and Drug Administration, Jefferson, AR, USA.ORCID 0000-0003-4380-2356
Dean P JonesClinical Biomarkers Laboratory, Division of Pulmonary, Allergy, and Critical Care Medicine, 1371Emory University School of Medicine, Atlanta, GA, USA.
Michael A Schmidt466810Sovaris Aerospace, Boulder, CO, USA.ORCID 0000-0001-8765-5306
William B MattesDivision of Systems Biology, 4136National Center for Toxicological Research, US Food and Drug Administration, Jefferson, AR, USA.
National Center for Toxicological Research · USEmory University · USUniversity of Virginia · US

Funding

Pilot Project ProgramP30ES019776 · NIEHS · EMORY UNIVERSITY · PI William Michael Caudle · 2013 to 2026
$22.6M
U2C Experimental CoreU2CES030163 · NIEHS · EMORY UNIVERSITY · PI JONES, DEAN PAUL, LI, SHUZHAO · 2018 to 2021
$3.6M
Maintenance and Enhancement of the Atlanta African American Maternal-Child Cohort: Exposome Profiling via High-resolution Metabolomics and Integration of Microbiome-Metabolome-Epigenome DataR24ES029490 · NIEHS · EMORY UNIVERSITY · PI ANNE Lang DUNLOP, Dean Paul Jones · 2018 to 2026
$2.4M
Exposome and Precision Medicine in NAFLDR01ES032189 · NIEHS · UNIVERSITY OF LOUISVILLE · PI CAVE, MATTHEW C · 2020 to 2022
$1.9M
Cytoplasmic-nuclear redox signaling: Disruption by dietary cadmium levelsR01ES023485 · NIEHS · EMORY UNIVERSITY · PI GO KANG, YOUNG-MI, JONES, DEAN PAUL · 2014 to 2018
$1.8M
Maintenance and Enhancement of the Atlanta African American Maternal-Child CohortU24ES029490 · NIEHS · EMORY UNIVERSITY · PI DUNLOP, ANNE LANG, JONES, DEAN PAUL · 2024 to 2025
$743k
Vanadium in lung mitochondria oxidative stressR21ES031824 · NIEHS · EMORY UNIVERSITY · PI GO KANG, YOUNG-MI, JONES, DEAN PAUL · 2020 to 2021
$429k
Intramural FDA HHS FD999999NIEHS NIH HHS P30 ES019776NIEHS NIH HHS R01 ES023485NIEHS NIH HHS R01 ES032189NIEHS NIH HHS R21 ES031824NIEHS NIH HHS R24 ES029490NIEHS NIH HHS U24 ES029490NIEHS NIH HHS U2C ES030163
6 · The paper itself

Abstract

Metabolomics is unique among omics technologies in being applicable to metabolism and toxicity studies broadly across organisms (e.g., humans, other mammals, model organisms, and even bacteria) and across biological materials (e.g., blood, urine, saliva, biopsy, and stool), including cultured cells and subcellular fractions. Metabolomics can be used to characterize biologic response patterns in humans as well as to support mechanistic studies in model systems and ex vivo studies. A broad range of resources are available, including publicly accessible data repositories (e.g., Metabolomics Workbench), tools for biostatistics and bioinformatics (e.g., MetaboAnalyst), metabolite identification (e.g., Metlin), and pathway analysis (e.g., Kyoto Encyclopedia of Genes and Genomes). Thus, metabolomics is more than a promise of the future; metabolomics is already available as a translational approach to facilitate precision medicine. This ACT Symposium review will contain an introduction to metabolomics in toxicity studies followed by sections on translational metabolic networks, translational metabolite biomarkers of acetaminophen-induced acute liver injury, translational framework using high-resolution metabolomics for integrated pharmacokinetics and pharmacodynamics, and precision medicine applications: extracting actionable targets from untargeted metabolomics data following one year in space.

Indexed as

MetabolomicsPrecision MedicineAcetaminophenAnimalsAnticonvulsantsBiomarkersChemical and Drug Induced Liver InjuryHumansAcetaminophenAnticonvulsantsBiomarkersmetabolomicsprecision medicinetoxicity

Identifiers

PMID34514887
PMCPMC8443142
OpenAlexW3200806192

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.