Evidence map›Paper›PMID 34515306›Full record

ArticlePathogens and disease2021

Analysis of Orientia tsutsugamushi promoter activity.

Jason R Hunt, Jason A Carlyon

Open access · bronzeAbstract read
In one paragraph

Article in Pathogens and disease, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Transformation and allelic exchange inbioRxiv : the preprint server for biology · 2026
    Article
  3. Article
  4. Article
  5. Review
  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Jason R HuntDepartment of Microbiology and Immunology, Virginia Commonwealth University (VCU) Medical Center, School of Medicine, VCU, Richmond, VA 23298, USA.
Jason A CarlyonDepartment of Microbiology and Immunology, Virginia Commonwealth University (VCU) Medical Center, School of Medicine, VCU, Richmond, VA 23298, USA.ORCID 0000-0003-2778-5066
Virginia Commonwealth University Medical Center · US

Funding

Defining the pathobiological roles of Orientia tsutsugamushi Ank proteinsR01AI123346 · NIAID · VIRGINIA COMMONWEALTH UNIVERSITY · PI CARLYON, JASON A · 2017 to 2020
$1.5M
Functional characterization of an Orientia tsutsugamushi nucleomodulinR21AI152513 · NIAID · VIRGINIA COMMONWEALTH UNIVERSITY · PI CARLYON, JASON A · 2020 to 2021
$411k
NIAID NIH HHS R01 AI123346NIAID NIH HHS R21 AI152513
6 · The paper itself

Abstract

Orientia tsutsugamushi is an obligate intracellular bacterium that causes scrub typhus, a potentially fatal rickettsiosis, and for which no genetic tools exist. Critical to addressing this technical gap is to identify promoters for driving expression of antibiotic resistance and fluorescence reporter genes in O. tsutsugamushi. Such promoters would need to be highly conserved among strains, expressed throughout infection, and exhibit strong activity. We examined the untranslated regions upstream of O. tsutsugamushi genes encoding outer membrane protein A (ompA), 22-kDa type-specific antigen (tsa22) and tsa56. The bacterium transcribed all three during infection of monocytic, endothelial and epithelial cells. Examination of the upstream noncoding regions revealed putative ribosome binding sites, one set of predicted -10 and -35 sequences for ompA and two sets of -10 and -35 sequences for tsa22 and tsa56. Comparison of these regions among geographically diverse O. tsutsugamushi patient isolates revealed nucleotide identities ranging from 84.8 to 100.0%. Upon examination of the candidates for the ability to drive green fluorescence protein expression in Escherichia coli, varying activities were observed with one of the tsa22 promoters being the strongest. Identification and validation of O. tsutsugamushi promoters is an initial key step toward genetically manipulating this important pathogen.

Indexed as

Promoter Regions, GeneticAnimalsAntigens, BacterialBacterial Outer Membrane ProteinsBacterial ProteinsCell LineGreen Fluorescent ProteinsHaplorhiniHeLa CellsHumansOrientia tsutsugamushiRickettsia InfectionsScrub TyphusTHP-1 CellsAntigens, BacterialBacterial Outer Membrane ProteinsBacterial ProteinsGreen Fluorescent ProteinsOMPA outer membrane proteinsOrientia tsutsugamushipromoterRickettsiaRickettsialesscrub typhus

Identifiers

PMID34515306
PMCPMC8460164
OpenAlexW3200070024

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.