Evidence map›Paper›PMID 34520469›Full record

ArticlePLoS genetics2021

Joint effects of genes underlying a temperature specialization tradeoff in yeast.

Faisal AlZaben, Julie N Chuong, Melanie B Abrams, Rachel B Brem

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Evolutionary insights into an ancient fungal transition from land to sea.bioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Faisal AlZabenDepartment of Plant and Microbial Biology, UC Berkeley, Berkeley, California, United States of America.ORCID 0000-0001-5792-7307
Julie N ChuongDepartment of Plant and Microbial Biology, UC Berkeley, Berkeley, California, United States of America.ORCID 0000-0002-4388-9458
Melanie B AbramsDepartment of Plant and Microbial Biology, UC Berkeley, Berkeley, California, United States of America.ORCID 0000-0002-1478-223X
Rachel B BremDepartment of Plant and Microbial Biology, UC Berkeley, Berkeley, California, United States of America.ORCID 0000-0002-8587-9434
University of California, Berkeley · US

Funding

Mapping deep evolutionary divergences in cellular models of stress responseR01GM120430 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI BREM, RACHEL BETH · 2017 to 2025
$3.9M
NIGMS NIH HHS R01 GM120430
6 · The paper itself

Abstract

A central goal of evolutionary genetics is to understand, at the molecular level, how organisms adapt to their environments. For a given trait, the answer often involves the acquisition of variants at unlinked sites across the genome. Genomic methods have achieved landmark successes in pinpointing these adaptive loci. To figure out how a suite of adaptive alleles work together, and to what extent they can reconstitute the phenotype of interest, requires their transfer into an exogenous background. We studied the joint effect of adaptive, gain-of-function thermotolerance alleles at eight unlinked genes from Saccharomyces cerevisiae, when introduced into a thermosensitive sister species, S. paradoxus. Although the loci damped each other's beneficial impact (that is, they were subject to negative epistasis), most boosted high-temperature growth alone and in combination, and none was deleterious. The complete set of eight genes was sufficient to confer ~15% of the S. cerevisiae thermotolerance phenotype in the S. paradoxus background. The same loci also contributed to a heretofore unknown advantage in cold growth by S. paradoxus. Together, our data establish temperature resistance in yeasts as a model case of a genetically complex evolutionary tradeoff, which can be partly reconstituted from the sequential assembly of unlinked underlying loci.

Indexed as

Genes, FungalTemperatureAllelesEpistasis, GeneticEvolution, MolecularSaccharomycesSaccharomyces cerevisiaeSpecies SpecificityThermotolerance

Identifiers

PMID34520469
PMCPMC8462698
OpenAlexW3199845307

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.