Evidence map›Paper›PMID 34523348›Full record

ArticleAmerican journal of physiology. Gastrointestinal and liver physiology2021

Single-cell analyses of human pancreas: characteristics of two populations of acinar cells in chronic pancreatitis.

Brandon M Blobner, Jami L Saloman, Celeste A Shelton Ohlsen, Randall Brand, Robert Lafyatis, Rita Bottino, Martin Wijkstrom, Amer H Zureikat, Kenneth K Lee, Aatur D Singhi and 3 more

Open access · greenAbstract read
In one paragraph

Article in American journal of physiology. Gastrointestinal and liver physiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Brandon M BlobnerDivision of Gastroenterology, Hepatology and Nutrition, Department of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania.
Jami L SalomanDivision of Gastroenterology, Hepatology and Nutrition, Department of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania.
Celeste A Shelton OhlsenDivision of Gastroenterology, Hepatology and Nutrition, Department of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania.
Randall BrandDivision of Gastroenterology, Hepatology and Nutrition, Department of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania.
Robert LafyatisDivision of Rheumatology and Clinical Immunology, Department of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania.
Rita BottinoInstitute of Cellular Therapeutics, Allegheny Health Network, Pittsburgh, Pennsylvania.
Martin WijkstromDivision of Transplantation, Department of Surgery, University of Pittsburgh, Pittsburgh, Pennsylvania.
Amer H ZureikatDivision of GI Surgical Oncology, Department of Surgery, University of Pittsburgh, Pittsburgh, Pennsylvania.
Kenneth K LeeDivision of GI Surgical Oncology, Department of Surgery, University of Pittsburgh, Pittsburgh, Pennsylvania.
Aatur D SinghiDepartment of Pathology, University of Pittsburgh, Pittsburgh, Pennsylvania.
Mark A RossCenter for Biologic Imaging, University of Pittsburgh, Pittsburgh, Pennsylvania.
Donna StolzCenter for Biologic Imaging, University of Pittsburgh, Pittsburgh, Pennsylvania.
David C WhitcombDivision of Gastroenterology, Hepatology and Nutrition, Department of Medicine, University of Pittsburgh, Pittsburgh, Pennsylvania.ORCID 0000-0002-4462-1410
University of Pittsburgh · USAllegheny Health Network · US

Funding

University of Pittsburgh Clinical and Translational Science InstituteUL1TR000005 · NCATS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2012 to 2015
$50.8M
Validation of biomarkers for risk prediction and early diagnosis of Pancreatic AdenocarcinomaU01CA200466 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Surinder K. Batra, Randall Brand · 2016 to 2026
$11.3M
Digestive Diseases Training ProgramT32DK063922 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ARTEEL, GAVIN E, YADAV, DHIRAJ · 2003 to 2022
$5.2M
Neuropathic vs. inflammatory pain in chronic pancreatitis: can unique biomarkers be identified to guide mechanistic approaches to pain treatment?K01DK120737 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SALOMAN, JAMI LYNN · 2019 to 2023
$735k
Mechanism-based Approach to Pain in Chronic Pancreatitis (MAP-CP Study)R21DK122293 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SALOMAN, JAMI LYNN · 2020 to 2021
$446k
NCATS NIH HHS UL1 TR000005NCI NIH HHS U01 CA200466NIDDK NIH HHS K01 DK120737NIDDK NIH HHS R21 DK122293NIDDK NIH HHS T32 DK063922
6 · The paper itself

Abstract

Chronic pancreatitis (CP) is a complex inflammatory disorder with numerous associated genetic and environmental risk factors. The most distressing characteristic of CP is recalcitrant pain, often requiring surgical resection including total pancreatectomy with islet autotransplantation (TPIAT). We studied five consented subjects undergoing pancreatic resection and processed isolated cells for single-cell RNA sequencing (scRNA-Seq). Using high-dimensional transcriptomic cluster analysis, we identified 11 unique cell clusters in the pancreas tissue. These cell clusters include a cluster of undifferentiated/dedifferentiated cells and two unique clusters of acinar cells, one of which appears to be in a transitional stage. To determine the cellular response to protease inhibitor and stimulation, we treated aliquots of cells from one subject with a protease inhibitor cocktail with and without bethanechol (a muscarinic receptor agonist) at 100 and 400 µM and compared gene expression profiles. The protease inhibitors appeared to reduce cell stress. Pancreatic digestive enzymes and islet hormones were upregulated in both doses of bethanechol-treated cells compared with naïve cells. High-dose bethanechol appeared to be toxic and consistent with hyperstimulation. These studies demonstrate the feasibility of investigating human acinar cell physiology at the single-cell level and initial evidence that these cells retain responsiveness to agonist stimulation with predicted second messenger and transcriptomic responses.

Indexed as

Gene Expression ProfilingRNA-SeqSingle-Cell AnalysisTranscriptomeAcinar CellsCell DedifferentiationCluster AnalysisFeasibility StudiesHumansMuscarinic AgonistsPancreasPancreatectomyPancreaticoduodenectomyPancreatitis, ChronicProtease InhibitorsMuscarinic AgonistsProtease InhibitorspancreaspancreatitisRNA-Seqsingle cell

Identifiers

PMID34523348
PMCPMC8616588
OpenAlexW3199346788

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.