Evidence map›Paper›PMID 34560429›Full record

ArticleEuropean journal of medicinal chemistry2021

AZD5438-PROTAC: A selective CDK2 degrader that protects against cisplatin- and noise-induced hearing loss.

Santanu Hati, Marisa Zallocchi, Robert Hazlitt, Yuju Li, Sarath Vijayakumar, Jaeki Min, Zoran Rankovic, Sándor Lovas, Jian Zuo

Open access · greenAbstract read
In one paragraph

Article in European journal of medicinal chemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 41 citations in OpenAlex.

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  11. PROTACs in Ovarian Cancer: Current Advancements and Future Perspectives.International journal of molecular sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Santanu HatiDepartment of Biomedical Sciences, School of Medicine, Creighton University, Omaha, NE, 68178, USA.
Marisa ZallocchiDepartment of Biomedical Sciences, School of Medicine, Creighton University, Omaha, NE, 68178, USA.
Robert HazlittDepartment of Chemical Biology & Therapeutics, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Yuju LiDepartment of Biomedical Sciences, School of Medicine, Creighton University, Omaha, NE, 68178, USA.
Sarath VijayakumarDepartment of Biomedical Sciences, School of Medicine, Creighton University, Omaha, NE, 68178, USA.
Jaeki MinDepartment of Chemical Biology & Therapeutics, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Zoran RankovicDepartment of Chemical Biology & Therapeutics, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.
Sándor LovasDepartment of Biomedical Sciences, School of Medicine, Creighton University, Omaha, NE, 68178, USA.
Jian ZuoDepartment of Biomedical Sciences, School of Medicine, Creighton University, Omaha, NE, 68178, USA. Electronic address: jianzuo@creighton.edu.
Creighton University · USSt. Jude Children's Research Hospital · US

Funding

Viral Vector Technology (VVTSR)P30CA021765 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI Shondra Michelle Miller · 1985 to 2026
$166.9M
Understanding the progression of hearing loss in an endolymphatic hydrops modelP20GM139762 · NIGMS · CREIGHTON UNIVERSITY · PI Peter Stephen Steyger · 2021 to 2026
$16.1M
Genetic control of cellular conversion in the mature cochleaR01DC015010 · NIDCD · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI ZUO, JIAN · 2016 to 2020
$2.3M
Discovery of In Vivo Small Molecules for Hearing Protection Against Cisplatin and NoiseR01DC015444 · NIDCD · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI ZUO, JIAN · 2016 to 2018
$1.6M
NCI NIH HHS P30 CA021765NIDCD NIH HHS R01 DC015010NIDCD NIH HHS R01 DC015444NIGMS NIH HHS P20 GM139762
6 · The paper itself

Abstract

Cyclin-dependent kinase 2 (CDK2) is a potential therapeutic target for the treatment of hearing loss and cancer. Previously, we identified AZD5438 and AT7519-7 as potent inhibitors of CDK2, however, they also targeted additional kinases, leading to unwanted toxicities. Proteolysis Targeting Chimeras (PROTACs) are a new promising class of small molecules that can effectively direct specific proteins to proteasomal degradation. Herein we report the design, synthesis, and characterization of PROTACs of AT7519-7 and AZD5438 and the identification of PROTAC-8, an AZD5438-PROTAC, that exhibits selective, partial CDK2 degradation. Furthermore, PROTAC-8 protects against cisplatin ototoxicity and kainic acid excitotoxicity in zebrafish. Molecular dynamics simulations reveal the structural requirements for CDK2 degradation. Together, PROTAC-8 is among the first-in-class PROTACs with in vivo therapeutic activities and represents a new lead compound that can be further developed for better efficacy and selectivity for CDK2 degradation against hearing loss and cancer.

Indexed as

AnimalsAntineoplastic AgentsCell LineCisplatinCyclin-Dependent Kinase 2Dose-Response Relationship, DrugHearing Loss, Noise-InducedHumansImidazolesMolecular Dynamics SimulationMolecular StructureProtective AgentsProtein Kinase InhibitorsPyrimidinesStructure-Activity RelationshipZebrafishAntineoplastic AgentsAZD5438CDK2 protein, humanCisplatinCyclin-Dependent Kinase 2ImidazolesProtective AgentsProtein Kinase InhibitorsPyrimidinesCDK2-ProteolysisCisplatin-induced hearing lossNoise-induced hearing lossPROTAC

Identifiers

PMID34560429
PMCPMC8608744
OpenAlexW3199626449

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.