Evidence map›Paper›PMID 34581622›Full record

ArticleScience (New York, N.Y.)2021

A prenylated dsRNA sensor protects against severe COVID-19.

Arthur Wickenhagen, Elena Sugrue, Spyros Lytras, Srikeerthana Kuchi, Marko Noerenberg, Matthew L Turnbull, Colin Loney, Vanessa Herder, Jay Allan, Innes Jarmson and 39 more

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 164 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
164citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

164 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Cold-adapted RNA polymerase fromProceedings of the National Academy of Sciences of the United States of America · 2026
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  16. The FunctionalInternational journal of molecular sciences · 2026
    Article
  17. Overexpression ofJournal of clinical medicine · 2026
    Article
  18. Article
  19. Article
  20. Review

104 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

49 authors.

Arthur WickenhagenMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0001-5470-1505
Elena Sugrue *Medical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0001-5014-9522
Spyros Lytras *Medical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0003-4202-6682
Srikeerthana Kuchi *Medical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.
Marko Noerenberg *Medical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0002-4834-8888
Matthew L Turnbull *Medical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0002-7234-5871
Colin LoneyMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0002-0508-1781
Vanessa HerderMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0003-4814-1382
Jay AllanMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.
Innes JarmsonMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.
Natalia Cameron-RuizMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0001-6945-1932
Margus VarjakMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0003-2608-5148
Rute M PintoMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0003-3291-1397
Jeffrey Y LeeDepartment of Biochemistry, University of Oxford, Oxford, UK.ORCID 0000-0002-5146-0037
Louisa IselinMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.
Natasha PalmaluxMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0002-4246-6082
Douglas G StewartMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.
Simon SwinglerMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0001-7317-8318
Edward J D GreenwoodCambridge Institute of Therapeutic Immunology and Infectious Disease, University of Cambridge, Cambridge, UK.ORCID 0000-0002-5224-0263
Thomas W M CrozierCambridge Institute of Therapeutic Immunology and Infectious Disease, University of Cambridge, Cambridge, UK.ORCID 0000-0003-0951-4588
Quan GuMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0002-1201-6734
Emma L DaviesMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0002-8416-9203
Sara ClohiseyRoslin Institute, University of Edinburgh, Edinburgh, UK.ORCID 0000-0001-7489-9846
Bo WangRoslin Institute, University of Edinburgh, Edinburgh, UK.ORCID 0000-0002-1580-797X
Fabio Trindade Maranhão CostaLaboratory of Tropical Diseases, Department of Genetics, Evolution, Microbiology and Immunology, Institute of Biology, University of Campinas, Campinas, Sao Paolo, Brazil.ORCID 0000-0001-9969-7300
Monique Freire SantanaDepartment of Education and Research, Oncology Control Centre of Amazonas State (FCECON), Manaus, Amazonas, Brazil.ORCID 0000-0001-7849-6112
Luiz Carlos de Lima FerreiraPostgraduate Program in Tropical Medicine, Tropical Medicine Foundation Dr. Heitor Vieira Dourado, Manaus, Amazonas, Brazil.ORCID 0000-0002-9657-939X
Lee MurphyEdinburgh Clinical Research Facility, University of Edinburgh, Western General Hospital, Edinburgh, UK.ORCID 0000-0001-6467-7449
Angie FawkesEdinburgh Clinical Research Facility, University of Edinburgh, Western General Hospital, Edinburgh, UK.ORCID 0000-0002-0657-8319
Alison MeynertMedical Research Council Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Western General Hospital, Edinburgh, UK.ORCID 0000-0001-5839-1751
Graeme GrimesMedical Research Council Human Genetics Unit, Institute of Genetics and Molecular Medicine, University of Edinburgh, Western General Hospital, Edinburgh, UK.
ISARIC4C Investigators
Joao Luiz Da Silva FilhoWellcome Centre for Molecular Parasitology, Institute of Infection, Immunity and Inflammation, University of Glasgow, Glasgow, UK.
Matthias MartiWellcome Centre for Molecular Parasitology, Institute of Infection, Immunity and Inflammation, University of Glasgow, Glasgow, UK.ORCID 0000-0003-1040-9566
Joseph HughesMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0003-2556-2563
Richard J StantonDivision of Infection & Immunity, Cardiff University, Cardiff, UK.ORCID 0000-0002-6799-1182
Eddie C Y WangDivision of Infection & Immunity, Cardiff University, Cardiff, UK.ORCID 0000-0002-2243-4964
Antonia HoMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.
Ilan DavisDepartment of Biochemistry, University of Oxford, Oxford, UK.ORCID 0000-0002-5385-3053
Ruth F JarrettMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0003-0390-3478
Alfredo CastelloMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0002-1499-4662
David L RobertsonMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0001-6338-0221
Malcolm G SempleNIHR Health Protection Research Unit for Emerging and Zoonotic Infections, Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool, UK.ORCID 0000-0001-9700-0418
Peter J M OpenshawNational Heart and Lung Institute, Imperial College London, London, UK.ORCID 0000-0002-7220-2555
Massimo PalmariniMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0001-7007-4070
Paul J LehnerCambridge Institute of Therapeutic Immunology and Infectious Disease, University of Cambridge, Cambridge, UK.ORCID 0000-0001-9383-1054
J Kenneth BaillieRoslin Institute, University of Edinburgh, Edinburgh, UK.ORCID 0000-0001-5258-793X
Suzannah J RihnMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0001-9495-4056
Sam J WilsonMedical Research Council-University of Glasgow Centre for Virus Research (CVR), Institute of Infection, Inflammation and Immunity, University of Glasgow, Glasgow, UK.ORCID 0000-0002-6065-0895

Funding

Biotechnology and Biological Sciences Research Council BB/M011224/1Department of Health CO-CIN-01Department of Health IS-BRC-1215-20013Medical Research Council G0701652Medical Research Council MC_PC_19025Medical Research Council MC_PC_19026Medical Research Council MC_PC_19059Medical Research Council MC_PC_20060Medical Research Council MC_UU_12014/10Medical Research Council MC_UU_12014/12Medical Research Council MC_UU_12014/3Medical Research Council MC_UU_12014/9Medical Research Council MR/K024752/1Medical Research Council MR/P001602/1Medical Research Council MR/P022642/1Medical Research Council MR/R021562/1Medical Research Council MR/S00971X/1Medical Research Council MR/S020039/1Medical Research Council MR/V000489/1Medical Research Council MR/V011561/1Medical Research Council MR/V028448/1Wellcome Trust 201366Wellcome Trust 201366/Z/16/ZWellcome Trust 204870/Z/16/ZWellcome Trust 209412Wellcome Trust 210688Wellcome Trust 210688/Z/18/Z
6 · The paper itself

Abstract

Inherited genetic factors can influence the severity of COVID-19, but the molecular explanation underpinning a genetic association is often unclear. Intracellular antiviral defenses can inhibit the replication of viruses and reduce disease severity. To better understand the antiviral defenses relevant to COVID-19, we used interferon-stimulated gene (ISG) expression screening to reveal that 2′-5′-oligoadenylate synthetase 1 (OAS1), through ribonuclease L, potently inhibits severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). We show that a common splice-acceptor single-nucleotide polymorphism (Rs10774671) governs whether patients express prenylated OAS1 isoforms that are membrane-associated and sense-specific regions of SARS-CoV-2 RNAs or if they only express cytosolic, nonprenylated OAS1 that does not efficiently detect SARS-CoV-2. In hospitalized patients, expression of prenylated OAS1 was associated with protection from severe COVID-19, suggesting that this antiviral defense is a major component of a protective antiviral response.

Indexed as

2',5'-Oligoadenylate Synthetase5' Untranslated RegionsA549 CellsAnimalsChiropteraCoronaviridaeCOVID-19EndoribonucleasesHumansInterferonsIsoenzymesPhosphoric Diester HydrolasesPolymorphism, Single NucleotideProtein PrenylationRetroelementsRNA, Double-Stranded2-5A-dependent ribonuclease2',5'-Oligoadenylate Synthetase5' Untranslated RegionsEndoribonucleasesInterferonsIsoenzymesOAS1 protein, humanOAS3 protein, humanPhosphoric Diester HydrolasesRetroelementsRNA, Double-StrandedRNA, Viral

Identifiers

PMID34581622
PMCPMC7612834

What Socratic holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.