Evidence map›Paper›PMID 34581821›Full record

ArticleNucleic acids research2021

Cockayne syndrome group A and ferrochelatase finely tune ribosomal gene transcription and its response to UV irradiation.

Manuela Lanzafame, Giulia Branca, Claudia Landi, Mingyue Qiang, Bruno Vaz, Tiziana Nardo, Debora Ferri, Manuela Mura, Sebastian Iben, Miria Stefanini and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Manuela LanzafameInstitute of Molecular Genetics -L.L. Cavalli Sforza, CNR, 27100 Pavia, Italy.ORCID 0000-0002-0456-1134
Giulia BrancaInstitute of Molecular Genetics -L.L. Cavalli Sforza, CNR, 27100 Pavia, Italy.
Claudia LandiDepartment of Life Sciences, University of Siena, 53100 Siena, Italy.
Mingyue QiangDepartment of Dermatology and Allergic Diseases, Ulm University, Albert-Einstein Allee 23, 89081 Ulm, Germany.
Bruno VazInstitute of Molecular Genetics -L.L. Cavalli Sforza, CNR, 27100 Pavia, Italy.
Tiziana NardoInstitute of Molecular Genetics -L.L. Cavalli Sforza, CNR, 27100 Pavia, Italy.
Debora FerriInstitute of Molecular Genetics -L.L. Cavalli Sforza, CNR, 27100 Pavia, Italy.
Manuela MuraInstitute of Molecular Genetics -L.L. Cavalli Sforza, CNR, 27100 Pavia, Italy.
Sebastian IbenDepartment of Dermatology and Allergic Diseases, Ulm University, Albert-Einstein Allee 23, 89081 Ulm, Germany.ORCID 0000-0002-5207-2861
Miria StefaniniInstitute of Molecular Genetics -L.L. Cavalli Sforza, CNR, 27100 Pavia, Italy.
Fiorenzo A PeveraliInstitute of Molecular Genetics -L.L. Cavalli Sforza, CNR, 27100 Pavia, Italy.
Luca BiniDepartment of Life Sciences, University of Siena, 53100 Siena, Italy.
Donata OrioliInstitute of Molecular Genetics -L.L. Cavalli Sforza, CNR, 27100 Pavia, Italy.ORCID 0000-0002-3830-3408
Istituto di Genetica Molecolare · ITUniversität Ulm · DEUniversity of Siena · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

CSA and CSB proteins are key players in transcription-coupled nucleotide excision repair (TC-NER) pathway that removes UV-induced DNA lesions from the transcribed strands of expressed genes. Additionally, CS proteins play relevant but still elusive roles in other cellular pathways whose alteration may explain neurodegeneration and progeroid features in Cockayne syndrome (CS). Here we identify a CS-containing chromatin-associated protein complex that modulates rRNA transcription. Besides RNA polymerase I (RNAP1) and specific ribosomal proteins (RPs), the complex includes ferrochelatase (FECH), a well-known mitochondrial enzyme whose deficiency causes erythropoietic protoporphyria (EPP). Impairment of either CSA or FECH functionality leads to reduced RNAP1 occupancy on rDNA promoter that is associated to reduced 47S pre-rRNA transcription. In addition, reduced FECH expression leads to an abnormal accumulation of 18S rRNA that in primary dermal fibroblasts from CS and EPP patients results in opposed rRNA amounts. After cell irradiation with UV light, CSA triggers the dissociation of the CSA-FECH-CSB-RNAP1-RPs complex from the chromatin while it stabilizes its binding to FECH. Besides disclosing a function for FECH within nucleoli, this study sheds light on the still unknown mechanisms through which CSA modulates rRNA transcription.

Indexed as

Cell Line, TransformedCell SurvivalChromatin ImmunoprecipitationCockayne SyndromeDNA DamageDNA HelicasesDNA RepairDNA Repair EnzymesFerrochelataseFibroblastsGene Expression RegulationHumansPoly-ADP-Ribose Binding ProteinsRibosomal ProteinsRNA Polymerase IRNA, RibosomalDNA HelicasesDNA Repair EnzymesERCC6 protein, humanERCC8 protein, humanFECH protein, humanFerrochelatasePoly-ADP-Ribose Binding ProteinsRibosomal ProteinsRNA Polymerase IRNA, RibosomalRPS10 protein, humanRPS15A protein, humanTranscription Factors

Identifiers

PMID34581821
PMCPMC8565352
OpenAlexW3204852749

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.