Evidence map›Paper›PMID 34583465›Full record

ArticleACS nano2021

Deep Learning of Nanopore Sensing Signals Using a Bi-Path Network.

Dario Dematties, Chenyu Wen, Mauricio David Pérez, Dian Zhou, Shi-Li Zhang

Abstract read
In one paragraph

Article in ACS nano, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Dario DemattiesInstituto de Ciencias Humanas, Sociales y Ambientales CONICET Mendoza Technological Scientific Center, Mendoza M5500, Argentina.ORCID 0000-0002-8726-7837
Chenyu WenDivision of Solid-State Electronics, Department of Electrical Engineering, Uppsala University, SE-751 03 Uppsala, Sweden.ORCID 0000-0003-4395-7905
Mauricio David PérezDivision of Solid-State Electronics, Department of Electrical Engineering, Uppsala University, SE-751 03 Uppsala, Sweden.
Dian ZhouDepartment of Electrical and Computer Engineering, University of Texas at Dallas, Richardson, Texas 75080, United States.
Shi-Li ZhangDivision of Solid-State Electronics, Department of Electrical Engineering, Uppsala University, SE-751 03 Uppsala, Sweden.ORCID 0000-0003-2417-274X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Temporal changes in electrical resistance of a nanopore sensor caused by translocating target analytes are recorded as a sequence of pulses on current traces. Prevalent algorithms for feature extraction in pulse-like signals lack objectivity because empirical amplitude thresholds are user-defined to single out the pulses from the noisy background. Here, we use deep learning for feature extraction based on a bi-path network (B-Net). After training, the B-Net acquires the prototypical pulses and the ability of both pulse recognition and feature extraction without

Indexed as

Deep LearningNanoporesdeep learningfeature extractionnanopore sensorsneural networkpulse-like signals

Identifiers

PMID34583465
PMCPMC8482760

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.