Evidence map›Paper›PMID 34620091›Full record

ArticleBMC genomics2021

Integrated analysis of lncRNA-miRNA-mRNA ceRNA network in human aortic dissection.

Hao Zhang, Ce Bian, Simei Tu, Fanxing Yin, Panpan Guo, Jian Zhang, Xiaotong Song, Qingyang Liu, Chen Chen, Yanshuo Han

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 41 citations in OpenAlex.

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  15. Ribosome biogenesis in disease: new players and therapeutic targets.Signal transduction and targeted therapy · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Hao ZhangSchool of Life and Pharmaceutical Sciences, Dalian University of Technology, Dalian, China.
Ce BianDepartment of Cardiovascular Surgery, The General Hospital of the PLA Rocket Force, Beijing Normal University, Beijing, China.
Simei TuSchool of Life and Pharmaceutical Sciences, Dalian University of Technology, Dalian, China.
Fanxing YinSchool of Life and Pharmaceutical Sciences, Dalian University of Technology, Dalian, China.
Panpan GuoSchool of Life and Pharmaceutical Sciences, Dalian University of Technology, Dalian, China.
Jian ZhangDepartment for Vascular Surgery, First Hospital of China Medical University, Shenyang, China.
Xiaotong SongSchool of Life and Pharmaceutical Sciences, Dalian University of Technology, Dalian, China.
Qingyang LiuSchool of Life and Pharmaceutical Sciences, Dalian University of Technology, Dalian, China.
Chen ChenSchool of Biomedical Sciences, The University of Queensland, Brisbane, Australia.
Yanshuo HanSchool of Life and Pharmaceutical Sciences, Dalian University of Technology, Dalian, China. yanshuohan@dlut.edu.cn.
Dalian University · CNDalian University of Technology · CNBeijing Normal University · CNFirst Hospital of China Medical University · CNUniversity of Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMany studies on long chain non-coding RNAs (lncRNAs) are published in recent years. But the roles of lncRNAs in aortic dissection (AD) are still unclear and should be further examined. The present work focused on determining the molecular mechanisms underlying lncRNAs regulation in aortic dissection on the basis of the lncRNA-miRNA-mRNA competing endogenous RNA (ceRNA) network.

methodsThis study collected the lncRNAs (GSE52093), mRNAs (GSE52093) and miRNAs (GSE92427) expression data within human tissue samples with aortic dissection group and normal group based on Gene Expression Omnibus (GEO) database.

resultsThis study identified three differentially expressed lncRNAs (DELs), 19 differentially expressed miRNAs (DEmiRs) and 1046 differentially expressed mRNAs (DEGs) identified regarding aortic dissection. Furthermore, we constructed a lncRNA-miRNA-mRNA network through three lncRNAs (including two with up-regulation and one with down-regulation), five miRNAs (five with up-regulation), as well as 211 mRNAs (including 103 with up-regulation and 108 with down-regulation). Simultaneously, we conducted functional enrichment and pathway analyses on genes within the as-constructed ceRNA network. According to our PPI/ceRNA network and functional enrichment analysis results, four critical genes were found (E2F2, IGF1R, BDNF and PPP2R1B). In addition, E2F2 level was possibly modulated via lncRNA FAM87A-hsa-miR-31-5p/hsa-miR-7-5p or lncRNA C9orf106-hsa-miR-7-5p. The expression of IGF1R may be regulated by lncRNA FAM87A-hsa-miR-16-5p/hsa-miR-7-5p or lncRNA C9orf106-hsa-miR-7-5p.

conclusionIn conclusion, the ceRNA interaction axis we identified is a potentially critical target for treating AD. Our results shed more lights on the possible pathogenic mechanism in AD using a lncRNA-associated ceRNA network.

Indexed as

Aortic DissectionMicroRNAsRNA, Long NoncodingGene Regulatory NetworksHumansRNA, MessengerMicroRNAsRNA, Long NoncodingRNA, MessengerAortic dissectionceRNA networklncRNAmiRNA

Identifiers

PMID34620091
PMCPMC8495997
OpenAlexW3204354597

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.