Evidence map›Paper›PMID 34645978›Full record

ReviewOncogene2021

A highly annotated database of genes associated with platinum resistance in cancer.

Dongqing Huang, Sara R Savage, Anna P Calinawan, Chenwei Lin, Bing Zhang, Pei Wang, Timothy K Starr, Michael J Birrer, Amanda G Paulovich

Open access · hybridAbstract readReview
In one paragraph

Review in Oncogene, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed
8.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed, 139 citations in OpenAlex.

  1. Trial
  2. Imaging xCT with Immuno-PET in Therapy-Resistant Non-Small Cell Lung Cancer.Journal of nuclear medicine : official publication, Society of Nuclear Medicine · 2026
    Article
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23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Dongqing HuangClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Sara R SavageLester and Sue Smith Breast Center, Baylor College of Medicine, Houston, TX, USA.
Anna P CalinawanDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Chenwei LinClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
Bing ZhangLester and Sue Smith Breast Center, Baylor College of Medicine, Houston, TX, USA.ORCID http://orcid.org/0000-0001-8676-2425
Pei WangDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Timothy K StarrMasonic Cancer Center, University of Minnesota, Minneapolis, MN, USA.ORCID http://orcid.org/0000-0002-6308-3451
Michael J BirrerUniversity of Arkansas for Medical Sciences, Little Rock, AR, USA.
Amanda G PaulovichClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA, USA. apaulovi@fredhutch.org.ORCID http://orcid.org/0000-0001-6532-6499
Fred Hutch Cancer Center · USBaylor College of Medicine · USIcahn School of Medicine at Mount Sinai · USUniversity of Arkansas for Medical Sciences · USUniversity of Minnesota · US

Funding

Proteogenomic Studies aimed at understanding ovarian tumor responses to agents targeting the DNA damage response and translating this knowledge into clinical benefitU01CA214114 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BIRRER, MICHAEL, PAULOVICH, AMANDA G · 2017 to 2021
$8.4M
Systems Biology based Proteogenomic Translator for Cancer Marker Discovery towards Precision MedicineU24CA210993 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI SCHADT, ERIC E, WANG, PEI · 2016 to 2020
$4.6M
High-Performance Compute Cluster for Comprehensive Cancer and Infectious Diseases ResearchS10OD028685 · OD · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BRADLEY, PHILIP · 2020 to 2020
$2.0M
Genetically Modified Natural Killer Cells for Cancer ImmunotherapyR21CA216652 · NCI · UNIVERSITY OF MINNESOTA · PI MORIARITY, BRANDEN S · 2018 to 2019
$362k
NCI NIH HHS R21 CA216652NCI NIH HHS U01 CA214114NCI NIH HHS U24 CA210993NIH HHS S10 OD028685
6 · The paper itself

Abstract

Platinum-based chemotherapy, including cisplatin, carboplatin, and oxaliplatin, is prescribed to 10-20% of all cancer patients. Unfortunately, platinum resistance develops in a significant number of patients and is a determinant of clinical outcome. Extensive research has been conducted to understand and overcome platinum resistance, and mechanisms of resistance can be categorized into several broad biological processes, including (1) regulation of drug entry, exit, accumulation, sequestration, and detoxification, (2) enhanced repair and tolerance of platinum-induced DNA damage, (3) alterations in cell survival pathways, (4) alterations in pleiotropic processes and pathways, and (5) changes in the tumor microenvironment. As a resource to the cancer research community, we provide a comprehensive overview accompanied by a manually curated database of the >900 genes/proteins that have been associated with platinum resistance over the last 30 years of literature. The database is annotated with possible pathways through which the curated genes are related to platinum resistance, types of evidence, and hyperlinks to literature sources. The searchable, downloadable database is available online at http://ptrc-ddr.cptac-data-view.org .

Indexed as

Databases, GeneticDrug Resistance, NeoplasmData CurationGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansNeoplasmsPlatinumTumor MicroenvironmentPlatinum

Identifiers

PMID34645978
PMCPMC8602037
OpenAlexW3205724645

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.