Evidence map›Paper›PMID 34700375›Full record

ArticlemBio2021

Cryo-Electron Microscopy Structure and Interactions of the Human Cytomegalovirus gHgLgO Trimer with Platelet-Derived Growth Factor Receptor Alpha.

Jing Liu, Adam Vanarsdall, Dong-Hua Chen, Andrea Chin, David Johnson, Theodore S Jardetzky

Open access · goldAbstract read
In one paragraph

Article in mBio, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jing LiuDepartment of Structural Biology, Stanford Universitygrid.168010.egrid.471392.a School of Medicine, Stanford, California, USA.
Adam VanarsdallDepartment of Molecular Microbiology & Immunology, Oregon Health & Science University, Portland, Oregon, USA.
Dong-Hua ChenDepartment of Structural Biology, Stanford Universitygrid.168010.egrid.471392.a School of Medicine, Stanford, California, USA.
Andrea ChinDepartment of Molecular Microbiology & Immunology, Oregon Health & Science University, Portland, Oregon, USA.
David JohnsonDepartment of Molecular Microbiology & Immunology, Oregon Health & Science University, Portland, Oregon, USA.ORCID 0000-0001-7498-3458
Theodore S JardetzkyDepartment of Structural Biology, Stanford Universitygrid.168010.egrid.471392.a School of Medicine, Stanford, California, USA.
Oregon Health & Science University · USStanford University · US

Funding

Human Cytomegalovirus Entry into Cells Mediated by Pentamer and Trimer ComplexesR01AI150659 · NIAID · OREGON HEALTH & SCIENCE UNIVERSITY · PI JARDETZKY, THEODORE S, JOHNSON, DAVID C. · 2020 to 2024
$3.7M
Human Cytomegalovirus Entry Glycoprotein ComplexesR21AI103722 · NIAID · STANFORD UNIVERSITY · PI JARDETZKY, THEODORE S · 2014 to 2015
$441k
Structure and function of HCMV gHgL complexesR21AI133192 · NIAID · STANFORD UNIVERSITY · PI JARDETZKY, THEODORE S · 2017 to 2018
$432k
NIAID NIH HHS R01 AI150659NIAID NIH HHS R21 AI103722NIAID NIH HHS R21 AI133192
6 · The paper itself

Abstract

Human cytomegalovirus (HCMV) is a herpesvirus that produces disease in transplant patients and newborn children. Entry of HCMV into cells relies on gH/gL trimer (gHgLgO) and pentamer (gHgLUL128-131) complexes that bind cellular receptors. Here, we studied the structure and interactions of the HCMV trimer, formed by AD169 strain gH and gL and TR strain gO proteins, with the human platelet-derived growth factor receptor alpha (PDGFRα). Three trimer surfaces make extensive contacts with three PDGFRα N-terminal domains, causing PDGFRα to wrap around gO in a structure similar to a human hand, explaining the high-affinity interaction. gO is among the least conserved HCMV proteins, with 8 distinct genotypes. We observed high conservation of residues mediating gO-gL interactions but more extensive gO variability in the PDGFRα interface. Comparisons between our trimer structure and a previously determined structure composed of different subunit genotypes indicate that gO variability is accommodated by adjustments in the gO-PDGFRα interface. We identified two loops within gO that were disordered and apparently glycosylated, which could be deleted without disrupting PDGFRα binding. We also identified four gO residues that contact PDGFRα, which when mutated produced markedly reduced receptor binding. These residues fall within conserved contact sites of gO with PDGFRα and may represent key targets for anti-trimer neutralizing antibodies and HCMV vaccines. Finally, we observe that gO mutations distant from the gL interaction site impact trimer expression, suggesting that the intrinsic folding or stability of gO can impact the efficiency of trimer assembly.

Indexed as

Cryoelectron MicroscopyCytomegalovirusFibroblastsHumansMembrane GlycoproteinsProtein BindingProtein MultimerizationReceptors, Platelet-Derived Growth FactorViral Envelope ProteinsVirus Internalizationglycoprotein H, Cytomegalovirusglycoprotein O, cytomegalovirusMembrane GlycoproteinsReceptors, Platelet-Derived Growth FactorViral Envelope Proteinscryo-EMHCMVhuman cytomegalovirusPDGFRαpentamerreceptor complextrimervirus entry

Identifiers

PMID34700375
PMCPMC8546573
OpenAlexW3210001102

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.