Evidence map›Paper›PMID 34745207›Full record

ArticleFrontiers in genetics2021

Genome-Wide Association Study of Growth Performance and Immune Response to Newcastle Disease Virus of Indigenous Chicken in Rwanda.

Richard Habimana, Kiplangat Ngeno, Tobias Otieno Okeno, Claire D' Andre Hirwa, Christian Keambou Tiambo, Nasser Kouadio Yao

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 21 citations in OpenAlex.

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  10. Fourth Report on Chicken Genes and Chromosomes 2022.Cytogenetic and genome research · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Richard HabimanaCollege of Agriculture, Animal Science and Veterinary Medicine, University of Rwanda, Kigali, Rwanda.
Kiplangat NgenoAnimal Breeding and Genomics Group, Department of Animal Science, Egerton University, Egerton, Kenya.
Tobias Otieno OkenoAnimal Breeding and Genomics Group, Department of Animal Science, Egerton University, Egerton, Kenya.
Claire D' Andre HirwaRwanda Agricultural and Animal Resources Development Board, Kigali, Rwanda.
Christian Keambou TiamboCentre for Tropical Livestock Genetics and Health, International Livestock Research Institute, Nairobi, Kenya.
Nasser Kouadio YaoBiosciences Eastern and Central Africa - International Livestock Research Institute (BecA-ILRI) Hub, Nairobi, Kenya.
Egerton University · KEInternational Livestock Research Institute · KERwanda Agriculture Board · RWUniversity of Rwanda · RW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A chicken genome has several regions with quantitative trait loci (QTLs). However, replication and confirmation of QTL effects are required particularly in African chicken populations. This study identified single nucleotide polymorphisms (SNPs) and putative genes responsible for body weight (BW) and antibody response (AbR) to Newcastle disease (ND) in Rwanda indigenous chicken (IC) using genome-wide association studies (GWAS). Multiple testing was corrected using chromosomal false detection rates of 5 and 10% for significant and suggestive thresholds, respectively. BioMart data mining and variant effect predictor tools were used to annotate SNPs and candidate genes, respectively. A total of four significant SNPs (rs74098018, rs13792572, rs314702374, and rs14123335) significantly (

Indexed as

genome-wide association studiesgrowth performanceindigenous chickenputative genequantitative trait locisingle nucleotide polymorphism

Identifiers

PMID34745207
PMCPMC8570395
OpenAlexW3193400850

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.