Evidence mapPaperPMID 34753383Full record

ArticleBioengineered2021

Identification of key molecular markers of acute coronary syndrome using peripheral blood transcriptome sequencing analysis and mRNA-lncRNA co-expression network construction.

Ming Shen, Rui Gong, Haibin Li, Zhihui Yang, Yunpeng Wang, Dandan Li

Abstract read
In one paragraph

Article in Bioengineered, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ming ShenDepartment of Cardiology, The First Hospital of Hebei Medical University, Shijiazhuang, China.
Rui GongDepartment of Internal medicine-Endocrinology, Children's Hospital of Hebei, Shijiazhuang, China.
Haibin LiDepartment of General Medicine, The Third Hospital of Hebei Medical University, Shijiazhuang, China.
Zhihui YangDepartment of General Medicine, The Third Hospital of Hebei Medical University, Shijiazhuang, China.
Yunpeng WangDepartment of General Medicine, The Third Hospital of Hebei Medical University, Shijiazhuang, China.
Dandan LiDepartment of General Medicine, The Third Hospital of Hebei Medical University, Shijiazhuang, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Acute coronary syndrome (ACS) is a term used to describe major cardiovascular diseases, and treatment of in-stent restenosis in patients with ACS remains a major clinical challenge. Further investigation into molecular markers of ACS may aid early diagnosis, and the treatment of ACS and post-treatment recurrence. In the present study, total RNA was extracted from the peripheral blood samples of 3 patients with ACS, 3 patients with percutaneous coronary intervention (PCI)_non-restenosis, 3 patients with PCI_restenosis and 3 healthy controls. Subsequently, RNA library construction and high-throughput sequencing were performed. DESeq2 package in R was used to screen genes that were differentially expressed between the different samples. Moreover, the intersection of the differentially expressed mRNAs (DEmRNAs) and differentially expressed long noncoding RNAs (DElncRNAs) obtained. GeneCodis4.0 was used to perform function enrichment for DEmRNAs, and lncRNA-mRNA co-expression network was constructed. The GSE60993 dataset was utilized for diagnostic analysis, and the aforementioned investigations were verified using in vitro studies. Results of the present study revealed a large number of DEmRNAs and DElncRNAs in the different groups. We selected genes in the top 10 of differential expression and also involved in the co-expression of lncRNA-mRNA for diagnostic analysis in the GSE60993 dataset. The area under curve (AUC) of

Indexed as

Gene Expression RegulationGene Regulatory NetworksSequence Analysis, RNAAcute Coronary SyndromeAgedArea Under CurveBiomarkersCoronary RestenosisFemaleGene Expression ProfilingHumansMaleMiddle AgedPercutaneous Coronary InterventionRNA, Long NoncodingRNA, MessengerBiomarkersRNA, Long NoncodingRNA, MessengerAcute coronary syndromediagnosticdifferential expressionlong non-coding RNAmRNA

Identifiers

PMID34753383
PMCPMC8809957

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.