Evidence map›Paper›PMID 34758633›Full record

ArticleArteriosclerosis, thrombosis, and vascular biology2022

Systems Approach to Integrating Preclinical Apolipoprotein E-Knockout Investigations Reveals Novel Etiologic Pathways and Master Atherosclerosis Network in Humans.

Megan M Shuey, Rachel R Xiang, M Elizabeth Moss, Brigett V Carvajal, Yihua Wang, Nicholas Camarda, Daniel Fabbri, Protiva Rahman, Jacob Ramsey, Alec Stepanian and 4 more

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Arteriosclerosis, thrombosis, and vascular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

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  6. Semi-Automated Data Curation from Biomedical Literature.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Megan M Shuey *Department of Medicine (M.M.S., J.R., Q.S.W., J.A.B.), Vanderbilt University Medical Center, Nashville, TN.
Rachel R Xiang *Molecular Cardiology Research Institute (R.R.X., M.E.M., B.V.C., Y.W., N.C., A.S., I.Z.J.), Tufts Medical Center, Boston, MA.
M Elizabeth MossMolecular Cardiology Research Institute (R.R.X., M.E.M., B.V.C., Y.W., N.C., A.S., I.Z.J.), Tufts Medical Center, Boston, MA.ORCID 0000-0002-9761-7263
Brigett V CarvajalMolecular Cardiology Research Institute (R.R.X., M.E.M., B.V.C., Y.W., N.C., A.S., I.Z.J.), Tufts Medical Center, Boston, MA.
Yihua WangMolecular Cardiology Research Institute (R.R.X., M.E.M., B.V.C., Y.W., N.C., A.S., I.Z.J.), Tufts Medical Center, Boston, MA.
Nicholas CamardaMolecular Cardiology Research Institute (R.R.X., M.E.M., B.V.C., Y.W., N.C., A.S., I.Z.J.), Tufts Medical Center, Boston, MA.ORCID 0000-0002-1853-0056
Daniel FabbriDepartment of Biomedical Informatics (D.F., P.R.), Vanderbilt University Medical Center, Nashville, TN.
Protiva RahmanDepartment of Biomedical Informatics (D.F., P.R.), Vanderbilt University Medical Center, Nashville, TN.
Jacob RamseyDepartment of Medicine (M.M.S., J.R., Q.S.W., J.A.B.), Vanderbilt University Medical Center, Nashville, TN.ORCID 0000-0003-0966-3292
Alec StepanianMolecular Cardiology Research Institute (R.R.X., M.E.M., B.V.C., Y.W., N.C., A.S., I.Z.J.), Tufts Medical Center, Boston, MA.ORCID 0000-0003-4719-5792
Paola SebastianiInstitute for Clinical Research and Health Policy Studies (P.S.), Tufts Medical Center, Boston, MA.
Quinn S Wells *Department of Medicine (M.M.S., J.R., Q.S.W., J.A.B.), Vanderbilt University Medical Center, Nashville, TN.ORCID 0000-0003-3899-0313
Joshua A Beckman *Department of Medicine (M.M.S., J.R., Q.S.W., J.A.B.), Vanderbilt University Medical Center, Nashville, TN.ORCID 0000-0001-8332-8439
Iris Z Jaffe *Molecular Cardiology Research Institute (R.R.X., M.E.M., B.V.C., Y.W., N.C., A.S., I.Z.J.), Tufts Medical Center, Boston, MA.ORCID 0000-0001-9300-1253
Tufts Medical Center · USVanderbilt University Medical Center · US

Funding

The Vanderbilt Institute for Clinical and Translational Research (VICTR)UL1TR000445 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BERNARD, GORDON RAPHAEL · 2012 to 2016
$41.4M
The Role of Vascular MR-Regulated Genes in Vascular Function and DiseaseR01HL095590 · NHLBI · TUFTS MEDICAL CENTER · PI Iris Z Jaffe · 2009 to 2026
$7.7M
Tufts Post-Baccalaureate Research Education ProgramR25GM066567 · NIGMS · TUFTS UNIVERSITY BOSTON · PI RIOS, MARIBEL · 2002 to 2024
$5.7M
The Impact of Diabetes on Revascularization in BEST-CLIR01HL131977 · NHLBI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI ADAY, AARON W., BECKMAN, JOSHUA A · 2016 to 2020
$4.0M
Automated Storage and Retrieval of Biological SystemsS10RR025141 · NCRR · VANDERBILT UNIVERSITY · PI RODEN, DAN M · 2008 to 2008
$988k
NCATS NIH HHS UL1 TR000445NCRR NIH HHS S10 RR025141NHLBI NIH HHS R01 HL095590NHLBI NIH HHS R01 HL131977NIGMS NIH HHS R25 GM066567
6 · The paper itself

Abstract

objectiveAnimal models of atherosclerosis are used extensively to interrogate molecular mechanisms in serial fashion. We tested whether a novel systems biology approach to integration of preclinical data identifies novel pathways and regulators in human disease. Approach and Results: Of 716 articles published in

conclusionsPRESCIANT (Preclinical Science Integration and Translation) leverages published preclinical investigations to identify high-confidence pathways, networks, and regulators of human disease.

Indexed as

Gene Regulatory NetworksSystems BiologyAdultAgedAnimalsApolipoproteins EAtherosclerosisDisease Models, AnimalFemaleGenetic Predisposition to DiseaseHumansMaleMiceMice, Knockout, ApoEMiddle AgedPhenotypeApoE protein, humanApoe protein, mouseApolipoproteins Eatherosclerosiscyclooxygenase-2gene expressionLXR/RXRTREM1

Identifiers

PMID34758633
PMCPMC8887835
OpenAlexW3213769838

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.